Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha9Q91Y11 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.64■□□□□ 0.25
Pcdha9Q91Y11 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha9Q91Y11 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha9Q91Y11 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.64■□□□□ 0.25
Pcdha9Q91Y11 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha9Q91Y11 Gm25990-201ENSMUST00000102440 86 ntBASIC16.64■□□□□ 0.25
Pcdha9Q91Y11 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha9Q91Y11 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.64■□□□□ 0.25
Pcdha9Q91Y11 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha9Q91Y11 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha9Q91Y11 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.64■□□□□ 0.25
Pcdha9Q91Y11 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.64■□□□□ 0.25
Pcdha9Q91Y11 Gm28659-201ENSMUST00000188013 759 ntBASIC16.64■□□□□ 0.25
Pcdha9Q91Y11 Gm6089-201ENSMUST00000197666 938 ntBASIC16.64■□□□□ 0.25
Pcdha9Q91Y11 Gm5864-201ENSMUST00000202263 970 ntBASIC16.64■□□□□ 0.25
Pcdha9Q91Y11 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha9Q91Y11 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha9Q91Y11 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Pcdha9Q91Y11 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha9Q91Y11 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha9Q91Y11 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Pcdha9Q91Y11 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha9Q91Y11 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha9Q91Y11 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha9Q91Y11 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha9Q91Y11 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha9Q91Y11 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha9Q91Y11 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha9Q91Y11 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha9Q91Y11 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha9Q91Y11 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Pcdha9Q91Y11 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha9Q91Y11 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha9Q91Y11 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha9Q91Y11 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pcdha9Q91Y11 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha9Q91Y11 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha9Q91Y11 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha9Q91Y11 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha9Q91Y11 Gm7862-201ENSMUST00000121461 292 ntBASIC16.63■□□□□ 0.25
Pcdha9Q91Y11 Gm27646-201ENSMUST00000183989 110 ntBASIC16.63■□□□□ 0.25
Pcdha9Q91Y11 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha9Q91Y11 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.63■□□□□ 0.25
Pcdha9Q91Y11 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.63■□□□□ 0.25
Pcdha9Q91Y11 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha9Q91Y11 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha9Q91Y11 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.63■□□□□ 0.25
Pcdha9Q91Y11 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Pcdha9Q91Y11 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Pcdha9Q91Y11 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha9Q91Y11 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha9Q91Y11 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha9Q91Y11 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha9Q91Y11 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha9Q91Y11 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha9Q91Y11 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha9Q91Y11 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha9Q91Y11 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha9Q91Y11 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Pcdha9Q91Y11 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha9Q91Y11 Gm11452-201ENSMUST00000122376 690 ntBASIC16.62■□□□□ 0.25
Pcdha9Q91Y11 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.62■□□□□ 0.25
Pcdha9Q91Y11 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha9Q91Y11 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Pcdha9Q91Y11 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha9Q91Y11 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.62■□□□□ 0.25
Pcdha9Q91Y11 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha9Q91Y11 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.62■□□□□ 0.25
Pcdha9Q91Y11 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha9Q91Y11 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha9Q91Y11 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Pcdha9Q91Y11 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Pcdha9Q91Y11 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha9Q91Y11 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha9Q91Y11 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha9Q91Y11 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha9Q91Y11 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Pcdha9Q91Y11 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha9Q91Y11 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha9Q91Y11 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha9Q91Y11 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha9Q91Y11 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha9Q91Y11 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha9Q91Y11 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha9Q91Y11 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha9Q91Y11 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha9Q91Y11 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha9Q91Y11 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha9Q91Y11 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdha9Q91Y11 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha9Q91Y11 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha9Q91Y11 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Pcdha9Q91Y11 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.61■□□□□ 0.25
Pcdha9Q91Y11 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha9Q91Y11 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Pcdha9Q91Y11 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Pcdha9Q91Y11 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha9Q91Y11 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdha9Q91Y11 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms