Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb4Q91XZ6 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb4Q91XZ6 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.6■□□□□ 0.09
Pcdhb4Q91XZ6 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb4Q91XZ6 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb4Q91XZ6 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb4Q91XZ6 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb4Q91XZ6 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb4Q91XZ6 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Pcdhb4Q91XZ6 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Pcdhb4Q91XZ6 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb4Q91XZ6 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb4Q91XZ6 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
Pcdhb4Q91XZ6 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb4Q91XZ6 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb4Q91XZ6 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb4Q91XZ6 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb4Q91XZ6 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb4Q91XZ6 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb4Q91XZ6 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb4Q91XZ6 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb4Q91XZ6 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb4Q91XZ6 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb4Q91XZ6 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb4Q91XZ6 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb4Q91XZ6 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb4Q91XZ6 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb4Q91XZ6 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb4Q91XZ6 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb4Q91XZ6 Gm25016-201ENSMUST00000158399 131 ntBASIC15.59■□□□□ 0.09
Pcdhb4Q91XZ6 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.59■□□□□ 0.09
Pcdhb4Q91XZ6 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.59■□□□□ 0.09
Pcdhb4Q91XZ6 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb4Q91XZ6 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Pcdhb4Q91XZ6 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb4Q91XZ6 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb4Q91XZ6 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb4Q91XZ6 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb4Q91XZ6 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb4Q91XZ6 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Pcdhb4Q91XZ6 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb4Q91XZ6 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb4Q91XZ6 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Pcdhb4Q91XZ6 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb4Q91XZ6 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb4Q91XZ6 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb4Q91XZ6 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb4Q91XZ6 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.09
Pcdhb4Q91XZ6 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhb4Q91XZ6 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Pcdhb4Q91XZ6 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhb4Q91XZ6 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhb4Q91XZ6 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhb4Q91XZ6 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Pcdhb4Q91XZ6 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
Pcdhb4Q91XZ6 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb4Q91XZ6 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Pcdhb4Q91XZ6 Gm11950-201ENSMUST00000121615 838 ntBASIC15.58■□□□□ 0.08
Pcdhb4Q91XZ6 Gm23634-201ENSMUST00000175071 91 ntBASIC15.58■□□□□ 0.08
Pcdhb4Q91XZ6 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.58■□□□□ 0.08
Pcdhb4Q91XZ6 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb4Q91XZ6 App-207ENSMUST00000227737 2827 ntBASIC15.58■□□□□ 0.08
Pcdhb4Q91XZ6 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb4Q91XZ6 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Pcdhb4Q91XZ6 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Pcdhb4Q91XZ6 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb4Q91XZ6 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb4Q91XZ6 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb4Q91XZ6 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb4Q91XZ6 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb4Q91XZ6 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb4Q91XZ6 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb4Q91XZ6 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb4Q91XZ6 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb4Q91XZ6 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb4Q91XZ6 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.57■□□□□ 0.08
Pcdhb4Q91XZ6 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb4Q91XZ6 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.57■□□□□ 0.08
Pcdhb4Q91XZ6 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb4Q91XZ6 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb4Q91XZ6 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb4Q91XZ6 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb4Q91XZ6 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb4Q91XZ6 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Pcdhb4Q91XZ6 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb4Q91XZ6 Gm6659-201ENSMUST00000174752 547 ntBASIC15.57■□□□□ 0.08
Pcdhb4Q91XZ6 Gm45328-201ENSMUST00000210942 917 ntBASIC15.57■□□□□ 0.08
Pcdhb4Q91XZ6 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb4Q91XZ6 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb4Q91XZ6 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.57■□□□□ 0.08
Pcdhb4Q91XZ6 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb4Q91XZ6 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Pcdhb4Q91XZ6 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb4Q91XZ6 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb4Q91XZ6 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb4Q91XZ6 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb4Q91XZ6 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb4Q91XZ6 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb4Q91XZ6 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb4Q91XZ6 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms