Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14□□□□□ -0.17
Pcdhga3Q91XY5 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhga3Q91XY5 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhga3Q91XY5 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhga3Q91XY5 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhga3Q91XY5 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhga3Q91XY5 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Pcdhga3Q91XY5 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Pcdhga3Q91XY5 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC13.99□□□□□ -0.17
Pcdhga3Q91XY5 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhga3Q91XY5 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhga3Q91XY5 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Pcdhga3Q91XY5 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.99□□□□□ -0.17
Pcdhga3Q91XY5 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.99□□□□□ -0.17
Pcdhga3Q91XY5 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Pcdhga3Q91XY5 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhga3Q91XY5 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Pcdhga3Q91XY5 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.99□□□□□ -0.17
Pcdhga3Q91XY5 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.99□□□□□ -0.17
Pcdhga3Q91XY5 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhga3Q91XY5 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.99□□□□□ -0.17
Pcdhga3Q91XY5 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Pcdhga3Q91XY5 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhga3Q91XY5 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhga3Q91XY5 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhga3Q91XY5 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhga3Q91XY5 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhga3Q91XY5 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhga3Q91XY5 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhga3Q91XY5 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhga3Q91XY5 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhga3Q91XY5 AC132265.1-201ENSMUST00000219233 1665 ntBASIC13.98□□□□□ -0.17
Pcdhga3Q91XY5 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhga3Q91XY5 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhga3Q91XY5 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhga3Q91XY5 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhga3Q91XY5 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhga3Q91XY5 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhga3Q91XY5 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
Pcdhga3Q91XY5 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Pcdhga3Q91XY5 Gm15794-201ENSMUST00000120182 631 ntBASIC13.98□□□□□ -0.17
Pcdhga3Q91XY5 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhga3Q91XY5 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.98□□□□□ -0.17
Pcdhga3Q91XY5 Gm7977-201ENSMUST00000193787 748 ntBASIC13.98□□□□□ -0.17
Pcdhga3Q91XY5 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhga3Q91XY5 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhga3Q91XY5 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Pcdhga3Q91XY5 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.98□□□□□ -0.17
Pcdhga3Q91XY5 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhga3Q91XY5 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhga3Q91XY5 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhga3Q91XY5 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhga3Q91XY5 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhga3Q91XY5 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhga3Q91XY5 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhga3Q91XY5 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhga3Q91XY5 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhga3Q91XY5 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.98□□□□□ -0.17
Pcdhga3Q91XY5 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhga3Q91XY5 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Pcdhga3Q91XY5 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhga3Q91XY5 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Pcdhga3Q91XY5 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.98□□□□□ -0.17
Pcdhga3Q91XY5 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhga3Q91XY5 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhga3Q91XY5 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhga3Q91XY5 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhga3Q91XY5 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhga3Q91XY5 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhga3Q91XY5 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Pcdhga3Q91XY5 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhga3Q91XY5 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhga3Q91XY5 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhga3Q91XY5 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhga3Q91XY5 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhga3Q91XY5 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhga3Q91XY5 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhga3Q91XY5 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.97□□□□□ -0.17
Pcdhga3Q91XY5 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhga3Q91XY5 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhga3Q91XY5 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhga3Q91XY5 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Pcdhga3Q91XY5 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Pcdhga3Q91XY5 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Pcdhga3Q91XY5 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.97□□□□□ -0.17
Pcdhga3Q91XY5 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhga3Q91XY5 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhga3Q91XY5 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.97□□□□□ -0.17
Pcdhga3Q91XY5 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Pcdhga3Q91XY5 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Pcdhga3Q91XY5 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhga3Q91XY5 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhga3Q91XY5 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.97□□□□□ -0.17
Pcdhga3Q91XY5 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhga3Q91XY5 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhga3Q91XY5 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhga3Q91XY5 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.97□□□□□ -0.17
Pcdhga3Q91XY5 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhga3Q91XY5 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhga3Q91XY5 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms