Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhgb5Q91XX5 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhgb5Q91XX5 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhgb5Q91XX5 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhgb5Q91XX5 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhgb5Q91XX5 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Pcdhgb5Q91XX5 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.52■□□□□ 0.08
Pcdhgb5Q91XX5 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.52■□□□□ 0.08
Pcdhgb5Q91XX5 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.52■□□□□ 0.08
Pcdhgb5Q91XX5 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.52■□□□□ 0.08
Pcdhgb5Q91XX5 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.52■□□□□ 0.08
Pcdhgb5Q91XX5 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhgb5Q91XX5 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhgb5Q91XX5 Gm5648-201ENSMUST00000122244 1587 ntBASIC15.52■□□□□ 0.07
Pcdhgb5Q91XX5 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhgb5Q91XX5 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.52■□□□□ 0.07
Pcdhgb5Q91XX5 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhgb5Q91XX5 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhgb5Q91XX5 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhgb5Q91XX5 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.52■□□□□ 0.07
Pcdhgb5Q91XX5 Haglr-201ENSMUST00000100000 2085 ntBASIC15.52■□□□□ 0.07
Pcdhgb5Q91XX5 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb5Q91XX5 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb5Q91XX5 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb5Q91XX5 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb5Q91XX5 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb5Q91XX5 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Pcdhgb5Q91XX5 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb5Q91XX5 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb5Q91XX5 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb5Q91XX5 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb5Q91XX5 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb5Q91XX5 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb5Q91XX5 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb5Q91XX5 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Pcdhgb5Q91XX5 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.51■□□□□ 0.07
Pcdhgb5Q91XX5 Gm25911-201ENSMUST00000157621 56 ntBASIC15.51■□□□□ 0.07
Pcdhgb5Q91XX5 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb5Q91XX5 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.51■□□□□ 0.07
Pcdhgb5Q91XX5 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb5Q91XX5 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb5Q91XX5 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Pcdhgb5Q91XX5 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb5Q91XX5 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb5Q91XX5 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb5Q91XX5 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb5Q91XX5 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb5Q91XX5 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb5Q91XX5 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Pcdhgb5Q91XX5 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb5Q91XX5 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb5Q91XX5 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb5Q91XX5 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb5Q91XX5 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb5Q91XX5 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Pcdhgb5Q91XX5 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb5Q91XX5 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb5Q91XX5 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb5Q91XX5 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Pcdhgb5Q91XX5 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhgb5Q91XX5 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhgb5Q91XX5 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhgb5Q91XX5 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Pcdhgb5Q91XX5 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.5■□□□□ 0.07
Pcdhgb5Q91XX5 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.5■□□□□ 0.07
Pcdhgb5Q91XX5 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhgb5Q91XX5 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhgb5Q91XX5 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhgb5Q91XX5 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.5■□□□□ 0.07
Pcdhgb5Q91XX5 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.5■□□□□ 0.07
Pcdhgb5Q91XX5 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.5■□□□□ 0.07
Pcdhgb5Q91XX5 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Pcdhgb5Q91XX5 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.5■□□□□ 0.07
Pcdhgb5Q91XX5 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.5■□□□□ 0.07
Pcdhgb5Q91XX5 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhgb5Q91XX5 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhgb5Q91XX5 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Pcdhgb5Q91XX5 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhgb5Q91XX5 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Pcdhgb5Q91XX5 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.5■□□□□ 0.07
Pcdhgb5Q91XX5 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhgb5Q91XX5 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
Pcdhgb5Q91XX5 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhgb5Q91XX5 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Pcdhgb5Q91XX5 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhgb5Q91XX5 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhgb5Q91XX5 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhgb5Q91XX5 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhgb5Q91XX5 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhgb5Q91XX5 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.49■□□□□ 0.07
Pcdhgb5Q91XX5 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhgb5Q91XX5 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhgb5Q91XX5 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.49■□□□□ 0.07
Pcdhgb5Q91XX5 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhgb5Q91XX5 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhgb5Q91XX5 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.49■□□□□ 0.07
Pcdhgb5Q91XX5 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhgb5Q91XX5 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Pcdhgb5Q91XX5 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhgb5Q91XX5 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms