Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhgc5Q91XW9 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
Pcdhgc5Q91XW9 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhgc5Q91XW9 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
Pcdhgc5Q91XW9 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.83■□□□□ 0.44
Pcdhgc5Q91XW9 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhgc5Q91XW9 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
Pcdhgc5Q91XW9 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhgc5Q91XW9 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhgc5Q91XW9 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhgc5Q91XW9 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhgc5Q91XW9 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhgc5Q91XW9 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgc5Q91XW9 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgc5Q91XW9 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgc5Q91XW9 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.82■□□□□ 0.44
Pcdhgc5Q91XW9 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgc5Q91XW9 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgc5Q91XW9 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgc5Q91XW9 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgc5Q91XW9 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgc5Q91XW9 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgc5Q91XW9 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.82■□□□□ 0.44
Pcdhgc5Q91XW9 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.82■□□□□ 0.44
Pcdhgc5Q91XW9 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.82■□□□□ 0.44
Pcdhgc5Q91XW9 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgc5Q91XW9 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgc5Q91XW9 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgc5Q91XW9 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgc5Q91XW9 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgc5Q91XW9 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgc5Q91XW9 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgc5Q91XW9 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgc5Q91XW9 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgc5Q91XW9 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgc5Q91XW9 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgc5Q91XW9 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgc5Q91XW9 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhgc5Q91XW9 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhgc5Q91XW9 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.81■□□□□ 0.44
Pcdhgc5Q91XW9 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgc5Q91XW9 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgc5Q91XW9 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Pcdhgc5Q91XW9 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.81■□□□□ 0.44
Pcdhgc5Q91XW9 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.81■□□□□ 0.44
Pcdhgc5Q91XW9 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.81■□□□□ 0.44
Pcdhgc5Q91XW9 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgc5Q91XW9 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgc5Q91XW9 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.81■□□□□ 0.44
Pcdhgc5Q91XW9 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Pcdhgc5Q91XW9 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgc5Q91XW9 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgc5Q91XW9 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgc5Q91XW9 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgc5Q91XW9 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgc5Q91XW9 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgc5Q91XW9 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.8■□□□□ 0.44
Pcdhgc5Q91XW9 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgc5Q91XW9 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgc5Q91XW9 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgc5Q91XW9 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.8■□□□□ 0.44
Pcdhgc5Q91XW9 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgc5Q91XW9 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdhgc5Q91XW9 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC17.8■□□□□ 0.44
Pcdhgc5Q91XW9 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdhgc5Q91XW9 Mir3113-201ENSMUST00000175478 76 ntBASIC17.8■□□□□ 0.44
Pcdhgc5Q91XW9 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgc5Q91XW9 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgc5Q91XW9 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.8■□□□□ 0.44
Pcdhgc5Q91XW9 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgc5Q91XW9 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.8■□□□□ 0.44
Pcdhgc5Q91XW9 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgc5Q91XW9 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Pcdhgc5Q91XW9 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgc5Q91XW9 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.8■□□□□ 0.44
Pcdhgc5Q91XW9 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgc5Q91XW9 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Pcdhgc5Q91XW9 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgc5Q91XW9 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgc5Q91XW9 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Pcdhgc5Q91XW9 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgc5Q91XW9 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgc5Q91XW9 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.79■□□□□ 0.44
Pcdhgc5Q91XW9 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Pcdhgc5Q91XW9 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgc5Q91XW9 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.79■□□□□ 0.44
Pcdhgc5Q91XW9 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC17.79■□□□□ 0.44
Pcdhgc5Q91XW9 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgc5Q91XW9 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.79■□□□□ 0.44
Pcdhgc5Q91XW9 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgc5Q91XW9 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgc5Q91XW9 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgc5Q91XW9 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgc5Q91XW9 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgc5Q91XW9 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgc5Q91XW9 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgc5Q91XW9 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgc5Q91XW9 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgc5Q91XW9 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Pcdhgc5Q91XW9 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms