Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ndc1Q8VCB1 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.78□□□□□ -0.04
Ndc1Q8VCB1 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.78□□□□□ -0.04
Ndc1Q8VCB1 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ndc1Q8VCB1 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ndc1Q8VCB1 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ndc1Q8VCB1 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ndc1Q8VCB1 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ndc1Q8VCB1 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ndc1Q8VCB1 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ndc1Q8VCB1 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Ndc1Q8VCB1 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ndc1Q8VCB1 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ndc1Q8VCB1 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.78□□□□□ -0.04
Ndc1Q8VCB1 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ndc1Q8VCB1 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ndc1Q8VCB1 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ndc1Q8VCB1 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ndc1Q8VCB1 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Ndc1Q8VCB1 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ndc1Q8VCB1 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
Ndc1Q8VCB1 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.77□□□□□ -0.04
Ndc1Q8VCB1 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ndc1Q8VCB1 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ndc1Q8VCB1 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ndc1Q8VCB1 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.77□□□□□ -0.05
Ndc1Q8VCB1 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.77□□□□□ -0.05
Ndc1Q8VCB1 Gm6550-201ENSMUST00000187574 993 ntBASIC14.77□□□□□ -0.05
Ndc1Q8VCB1 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.77□□□□□ -0.05
Ndc1Q8VCB1 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.77□□□□□ -0.05
Ndc1Q8VCB1 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
Ndc1Q8VCB1 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ndc1Q8VCB1 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ndc1Q8VCB1 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ndc1Q8VCB1 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ndc1Q8VCB1 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ndc1Q8VCB1 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Ndc1Q8VCB1 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Ndc1Q8VCB1 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ndc1Q8VCB1 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ndc1Q8VCB1 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ndc1Q8VCB1 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.77□□□□□ -0.05
Ndc1Q8VCB1 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Ndc1Q8VCB1 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ndc1Q8VCB1 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ndc1Q8VCB1 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
Ndc1Q8VCB1 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.76□□□□□ -0.05
Ndc1Q8VCB1 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ndc1Q8VCB1 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Ndc1Q8VCB1 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ndc1Q8VCB1 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ndc1Q8VCB1 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Ndc1Q8VCB1 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ndc1Q8VCB1 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.76□□□□□ -0.05
Ndc1Q8VCB1 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ndc1Q8VCB1 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.76□□□□□ -0.05
Ndc1Q8VCB1 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.76□□□□□ -0.05
Ndc1Q8VCB1 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.76□□□□□ -0.05
Ndc1Q8VCB1 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.76□□□□□ -0.05
Ndc1Q8VCB1 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.76□□□□□ -0.05
Ndc1Q8VCB1 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.76□□□□□ -0.05
Ndc1Q8VCB1 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.76□□□□□ -0.05
Ndc1Q8VCB1 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.76□□□□□ -0.05
Ndc1Q8VCB1 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.76□□□□□ -0.05
Ndc1Q8VCB1 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.76□□□□□ -0.05
Ndc1Q8VCB1 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.76□□□□□ -0.05
Ndc1Q8VCB1 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.76□□□□□ -0.05
Ndc1Q8VCB1 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.76□□□□□ -0.05
Ndc1Q8VCB1 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ndc1Q8VCB1 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.76□□□□□ -0.05
Ndc1Q8VCB1 Gm8825-201ENSMUST00000182565 998 ntBASIC14.76□□□□□ -0.05
Ndc1Q8VCB1 Gm4518-201ENSMUST00000182638 718 ntBASIC14.76□□□□□ -0.05
Ndc1Q8VCB1 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.76□□□□□ -0.05
Ndc1Q8VCB1 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.76□□□□□ -0.05
Ndc1Q8VCB1 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.76□□□□□ -0.05
Ndc1Q8VCB1 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.76□□□□□ -0.05
Ndc1Q8VCB1 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.76□□□□□ -0.05
Ndc1Q8VCB1 Gm5364-201ENSMUST00000216789 889 ntBASIC14.76□□□□□ -0.05
Ndc1Q8VCB1 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.76□□□□□ -0.05
Ndc1Q8VCB1 Gm15590-201ENSMUST00000078419 552 ntBASIC14.76□□□□□ -0.05
Ndc1Q8VCB1 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.76□□□□□ -0.05
Ndc1Q8VCB1 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ndc1Q8VCB1 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Ndc1Q8VCB1 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ndc1Q8VCB1 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ndc1Q8VCB1 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ndc1Q8VCB1 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.76□□□□□ -0.05
Ndc1Q8VCB1 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ndc1Q8VCB1 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Ndc1Q8VCB1 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ndc1Q8VCB1 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Ndc1Q8VCB1 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ndc1Q8VCB1 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ndc1Q8VCB1 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ndc1Q8VCB1 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ndc1Q8VCB1 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ndc1Q8VCB1 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ndc1Q8VCB1 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ndc1Q8VCB1 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ndc1Q8VCB1 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms