Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Rnf8Q8VC56 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf8Q8VC56 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf8Q8VC56 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf8Q8VC56 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf8Q8VC56 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Rnf8Q8VC56 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.15■□□□□ 0.02
Rnf8Q8VC56 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf8Q8VC56 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Rnf8Q8VC56 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.14■□□□□ 0.01
Rnf8Q8VC56 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf8Q8VC56 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.14■□□□□ 0.01
Rnf8Q8VC56 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf8Q8VC56 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf8Q8VC56 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf8Q8VC56 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
Rnf8Q8VC56 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf8Q8VC56 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf8Q8VC56 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf8Q8VC56 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Rnf8Q8VC56 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.14■□□□□ 0.01
Rnf8Q8VC56 Gm21362-201ENSMUST00000194272 928 ntBASIC15.14■□□□□ 0.01
Rnf8Q8VC56 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf8Q8VC56 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Rnf8Q8VC56 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf8Q8VC56 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Rnf8Q8VC56 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf8Q8VC56 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.14■□□□□ 0.01
Rnf8Q8VC56 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf8Q8VC56 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf8Q8VC56 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf8Q8VC56 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf8Q8VC56 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf8Q8VC56 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf8Q8VC56 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf8Q8VC56 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf8Q8VC56 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf8Q8VC56 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Rnf8Q8VC56 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf8Q8VC56 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf8Q8VC56 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf8Q8VC56 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf8Q8VC56 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf8Q8VC56 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.13■□□□□ 0.01
Rnf8Q8VC56 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf8Q8VC56 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf8Q8VC56 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.13■□□□□ 0.01
Rnf8Q8VC56 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf8Q8VC56 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf8Q8VC56 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Rnf8Q8VC56 Gm27704-201ENSMUST00000185094 107 ntBASIC15.13■□□□□ 0.01
Rnf8Q8VC56 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf8Q8VC56 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Rnf8Q8VC56 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf8Q8VC56 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Rnf8Q8VC56 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Rnf8Q8VC56 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf8Q8VC56 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf8Q8VC56 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf8Q8VC56 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.12■□□□□ 0.01
Rnf8Q8VC56 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Rnf8Q8VC56 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf8Q8VC56 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf8Q8VC56 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf8Q8VC56 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf8Q8VC56 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf8Q8VC56 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf8Q8VC56 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf8Q8VC56 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf8Q8VC56 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.12■□□□□ 0.01
Rnf8Q8VC56 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf8Q8VC56 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf8Q8VC56 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf8Q8VC56 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf8Q8VC56 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf8Q8VC56 Gm7367-201ENSMUST00000057611 492 ntBASIC15.12■□□□□ 0.01
Rnf8Q8VC56 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf8Q8VC56 App-207ENSMUST00000227737 2827 ntBASIC15.12■□□□□ 0.01
Rnf8Q8VC56 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf8Q8VC56 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf8Q8VC56 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf8Q8VC56 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.12■□□□□ 0.01
Rnf8Q8VC56 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf8Q8VC56 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf8Q8VC56 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf8Q8VC56 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.12■□□□□ 0.01
Rnf8Q8VC56 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf8Q8VC56 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf8Q8VC56 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf8Q8VC56 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf8Q8VC56 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf8Q8VC56 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf8Q8VC56 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf8Q8VC56 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Rnf8Q8VC56 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Rnf8Q8VC56 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.11■□□□□ 0.01
Rnf8Q8VC56 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf8Q8VC56 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.11■□□□□ 0.01
Rnf8Q8VC56 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf8Q8VC56 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms