Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc9Q8VC31 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.91■□□□□ 0.62
Ccdc9Q8VC31 Gm5408-201ENSMUST00000197998 747 ntBASIC18.91■□□□□ 0.62
Ccdc9Q8VC31 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.91■□□□□ 0.62
Ccdc9Q8VC31 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.91■□□□□ 0.62
Ccdc9Q8VC31 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc9Q8VC31 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc9Q8VC31 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc9Q8VC31 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc9Q8VC31 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc9Q8VC31 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Ccdc9Q8VC31 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc9Q8VC31 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc9Q8VC31 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC18.91■□□□□ 0.62
Ccdc9Q8VC31 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc9Q8VC31 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.91■□□□□ 0.62
Ccdc9Q8VC31 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc9Q8VC31 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc9Q8VC31 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC18.91■□□□□ 0.62
Ccdc9Q8VC31 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc9Q8VC31 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Ccdc9Q8VC31 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc9Q8VC31 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC18.9■□□□□ 0.62
Ccdc9Q8VC31 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc9Q8VC31 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc9Q8VC31 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc9Q8VC31 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc9Q8VC31 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc9Q8VC31 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc9Q8VC31 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc9Q8VC31 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc9Q8VC31 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc9Q8VC31 Gm2399-201ENSMUST00000104944 225 ntBASIC18.9■□□□□ 0.62
Ccdc9Q8VC31 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc9Q8VC31 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc9Q8VC31 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc9Q8VC31 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc9Q8VC31 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc9Q8VC31 Gm43205-201ENSMUST00000198622 1968 ntBASIC18.9■□□□□ 0.62
Ccdc9Q8VC31 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc9Q8VC31 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc9Q8VC31 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ccdc9Q8VC31 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ccdc9Q8VC31 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Ccdc9Q8VC31 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc9Q8VC31 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc9Q8VC31 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc9Q8VC31 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Ccdc9Q8VC31 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.89■□□□□ 0.61
Ccdc9Q8VC31 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Ccdc9Q8VC31 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc9Q8VC31 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc9Q8VC31 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc9Q8VC31 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc9Q8VC31 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc9Q8VC31 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc9Q8VC31 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc9Q8VC31 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.89■□□□□ 0.61
Ccdc9Q8VC31 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc9Q8VC31 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc9Q8VC31 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Ccdc9Q8VC31 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
Ccdc9Q8VC31 Mypopos-202ENSMUST00000205975 2321 ntBASIC18.89■□□□□ 0.61
Ccdc9Q8VC31 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC18.89■□□□□ 0.61
Ccdc9Q8VC31 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Ccdc9Q8VC31 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc9Q8VC31 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc9Q8VC31 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc9Q8VC31 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc9Q8VC31 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Ccdc9Q8VC31 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC18.88■□□□□ 0.61
Ccdc9Q8VC31 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Ccdc9Q8VC31 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc9Q8VC31 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc9Q8VC31 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
Ccdc9Q8VC31 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc9Q8VC31 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc9Q8VC31 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc9Q8VC31 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Ccdc9Q8VC31 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.88■□□□□ 0.61
Ccdc9Q8VC31 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc9Q8VC31 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Ccdc9Q8VC31 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
Ccdc9Q8VC31 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc9Q8VC31 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc9Q8VC31 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.88■□□□□ 0.61
Ccdc9Q8VC31 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc9Q8VC31 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc9Q8VC31 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.88■□□□□ 0.61
Ccdc9Q8VC31 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Ccdc9Q8VC31 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc9Q8VC31 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc9Q8VC31 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.88■□□□□ 0.61
Ccdc9Q8VC31 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc9Q8VC31 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc9Q8VC31 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC18.88■□□□□ 0.61
Ccdc9Q8VC31 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc9Q8VC31 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc9Q8VC31 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc9Q8VC31 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms