Protein–RNA interactions for Protein: Q8R2T8

Gtf3c5, General transcription factor 3C polypeptide 5, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c5Q8R2T8 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Gtf3c5Q8R2T8 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Gtf3c5Q8R2T8 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gtf3c5Q8R2T8 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gtf3c5Q8R2T8 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gtf3c5Q8R2T8 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.4■□□□□ 0.54
Gtf3c5Q8R2T8 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Gtf3c5Q8R2T8 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gtf3c5Q8R2T8 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gtf3c5Q8R2T8 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gtf3c5Q8R2T8 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gtf3c5Q8R2T8 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gtf3c5Q8R2T8 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Gtf3c5Q8R2T8 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Gtf3c5Q8R2T8 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Gtf3c5Q8R2T8 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Gtf3c5Q8R2T8 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gtf3c5Q8R2T8 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Gtf3c5Q8R2T8 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC18.39■□□□□ 0.53
Gtf3c5Q8R2T8 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Gtf3c5Q8R2T8 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gtf3c5Q8R2T8 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Gtf3c5Q8R2T8 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gtf3c5Q8R2T8 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.39■□□□□ 0.53
Gtf3c5Q8R2T8 Gm25745-201ENSMUST00000174945 133 ntBASIC18.39■□□□□ 0.53
Gtf3c5Q8R2T8 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.39■□□□□ 0.53
Gtf3c5Q8R2T8 Gm34391-201ENSMUST00000203706 907 ntBASIC18.39■□□□□ 0.53
Gtf3c5Q8R2T8 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.39■□□□□ 0.53
Gtf3c5Q8R2T8 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gtf3c5Q8R2T8 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gtf3c5Q8R2T8 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gtf3c5Q8R2T8 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gtf3c5Q8R2T8 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Gtf3c5Q8R2T8 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Gtf3c5Q8R2T8 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Gtf3c5Q8R2T8 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gtf3c5Q8R2T8 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gtf3c5Q8R2T8 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gtf3c5Q8R2T8 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gtf3c5Q8R2T8 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.38■□□□□ 0.53
Gtf3c5Q8R2T8 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC18.38■□□□□ 0.53
Gtf3c5Q8R2T8 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gtf3c5Q8R2T8 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gtf3c5Q8R2T8 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Gtf3c5Q8R2T8 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.38■□□□□ 0.53
Gtf3c5Q8R2T8 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gtf3c5Q8R2T8 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gtf3c5Q8R2T8 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Gtf3c5Q8R2T8 Gm8655-201ENSMUST00000221159 852 ntBASIC18.38■□□□□ 0.53
Gtf3c5Q8R2T8 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gtf3c5Q8R2T8 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Gtf3c5Q8R2T8 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gtf3c5Q8R2T8 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gtf3c5Q8R2T8 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gtf3c5Q8R2T8 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Gtf3c5Q8R2T8 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gtf3c5Q8R2T8 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gtf3c5Q8R2T8 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gtf3c5Q8R2T8 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gtf3c5Q8R2T8 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gtf3c5Q8R2T8 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Gtf3c5Q8R2T8 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gtf3c5Q8R2T8 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Gtf3c5Q8R2T8 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gtf3c5Q8R2T8 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gtf3c5Q8R2T8 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gtf3c5Q8R2T8 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gtf3c5Q8R2T8 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gtf3c5Q8R2T8 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gtf3c5Q8R2T8 Gm43347-201ENSMUST00000200226 580 ntBASIC18.37■□□□□ 0.53
Gtf3c5Q8R2T8 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC18.37■□□□□ 0.53
Gtf3c5Q8R2T8 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gtf3c5Q8R2T8 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gtf3c5Q8R2T8 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gtf3c5Q8R2T8 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gtf3c5Q8R2T8 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gtf3c5Q8R2T8 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gtf3c5Q8R2T8 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.37■□□□□ 0.53
Gtf3c5Q8R2T8 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC18.37■□□□□ 0.53
Gtf3c5Q8R2T8 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gtf3c5Q8R2T8 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gtf3c5Q8R2T8 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Gtf3c5Q8R2T8 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Gtf3c5Q8R2T8 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gtf3c5Q8R2T8 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Gtf3c5Q8R2T8 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gtf3c5Q8R2T8 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gtf3c5Q8R2T8 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gtf3c5Q8R2T8 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Gtf3c5Q8R2T8 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Gtf3c5Q8R2T8 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC18.36■□□□□ 0.53
Gtf3c5Q8R2T8 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Gtf3c5Q8R2T8 Gm27867-201ENSMUST00000184778 125 ntBASIC18.36■□□□□ 0.53
Gtf3c5Q8R2T8 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gtf3c5Q8R2T8 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.36■□□□□ 0.53
Gtf3c5Q8R2T8 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gtf3c5Q8R2T8 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Gtf3c5Q8R2T8 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gtf3c5Q8R2T8 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
Gtf3c5Q8R2T8 Rps4l-201ENSMUST00000071745 943 ntBASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms