Protein–RNA interactions for Protein: Q8R2N0

Ccdc59, Thyroid transcription factor 1-associated protein 26, mousemouse

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc59Q8R2N0 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc59Q8R2N0 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc59Q8R2N0 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc59Q8R2N0 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc59Q8R2N0 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Ccdc59Q8R2N0 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc59Q8R2N0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc59Q8R2N0 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc59Q8R2N0 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc59Q8R2N0 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.89□□□□□ -0.03
Ccdc59Q8R2N0 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc59Q8R2N0 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Ccdc59Q8R2N0 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.89□□□□□ -0.03
Ccdc59Q8R2N0 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc59Q8R2N0 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc59Q8R2N0 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Ccdc59Q8R2N0 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.89□□□□□ -0.03
Ccdc59Q8R2N0 Gm18958-201ENSMUST00000174258 762 ntBASIC14.89□□□□□ -0.03
Ccdc59Q8R2N0 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.89□□□□□ -0.03
Ccdc59Q8R2N0 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc59Q8R2N0 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc59Q8R2N0 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Ccdc59Q8R2N0 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc59Q8R2N0 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc59Q8R2N0 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc59Q8R2N0 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc59Q8R2N0 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ccdc59Q8R2N0 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc59Q8R2N0 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc59Q8R2N0 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc59Q8R2N0 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Ccdc59Q8R2N0 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ccdc59Q8R2N0 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc59Q8R2N0 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc59Q8R2N0 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc59Q8R2N0 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc59Q8R2N0 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc59Q8R2N0 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Ccdc59Q8R2N0 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc59Q8R2N0 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc59Q8R2N0 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Ccdc59Q8R2N0 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Ccdc59Q8R2N0 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Ccdc59Q8R2N0 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc59Q8R2N0 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc59Q8R2N0 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Ccdc59Q8R2N0 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc59Q8R2N0 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Ccdc59Q8R2N0 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc59Q8R2N0 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc59Q8R2N0 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc59Q8R2N0 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Ccdc59Q8R2N0 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.88□□□□□ -0.03
Ccdc59Q8R2N0 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc59Q8R2N0 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc59Q8R2N0 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Ccdc59Q8R2N0 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc59Q8R2N0 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc59Q8R2N0 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc59Q8R2N0 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc59Q8R2N0 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc59Q8R2N0 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.88□□□□□ -0.03
Ccdc59Q8R2N0 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc59Q8R2N0 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Ccdc59Q8R2N0 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc59Q8R2N0 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc59Q8R2N0 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc59Q8R2N0 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc59Q8R2N0 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc59Q8R2N0 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc59Q8R2N0 Gm7213-201ENSMUST00000215977 950 ntBASIC14.87□□□□□ -0.03
Ccdc59Q8R2N0 Gm7370-201ENSMUST00000219471 767 ntBASIC14.87□□□□□ -0.03
Ccdc59Q8R2N0 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc59Q8R2N0 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc59Q8R2N0 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.87□□□□□ -0.03
Ccdc59Q8R2N0 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Ccdc59Q8R2N0 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc59Q8R2N0 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Ccdc59Q8R2N0 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc59Q8R2N0 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc59Q8R2N0 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Ccdc59Q8R2N0 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc59Q8R2N0 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc59Q8R2N0 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc59Q8R2N0 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc59Q8R2N0 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc59Q8R2N0 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ccdc59Q8R2N0 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc59Q8R2N0 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc59Q8R2N0 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc59Q8R2N0 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc59Q8R2N0 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc59Q8R2N0 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc59Q8R2N0 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc59Q8R2N0 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc59Q8R2N0 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc59Q8R2N0 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc59Q8R2N0 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Ccdc59Q8R2N0 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc59Q8R2N0 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms