Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sf3a1Q8K4Z5 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Sf3a1Q8K4Z5 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sf3a1Q8K4Z5 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sf3a1Q8K4Z5 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sf3a1Q8K4Z5 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sf3a1Q8K4Z5 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sf3a1Q8K4Z5 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sf3a1Q8K4Z5 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sf3a1Q8K4Z5 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sf3a1Q8K4Z5 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sf3a1Q8K4Z5 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sf3a1Q8K4Z5 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sf3a1Q8K4Z5 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC19.17■□□□□ 0.66
Sf3a1Q8K4Z5 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sf3a1Q8K4Z5 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Sf3a1Q8K4Z5 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sf3a1Q8K4Z5 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sf3a1Q8K4Z5 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sf3a1Q8K4Z5 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sf3a1Q8K4Z5 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sf3a1Q8K4Z5 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sf3a1Q8K4Z5 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC19.17■□□□□ 0.66
Sf3a1Q8K4Z5 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sf3a1Q8K4Z5 Gm37584-201ENSMUST00000193595 1290 ntBASIC19.17■□□□□ 0.66
Sf3a1Q8K4Z5 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sf3a1Q8K4Z5 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sf3a1Q8K4Z5 Rps4l-201ENSMUST00000071745 943 ntBASIC19.17■□□□□ 0.66
Sf3a1Q8K4Z5 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sf3a1Q8K4Z5 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sf3a1Q8K4Z5 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Sf3a1Q8K4Z5 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sf3a1Q8K4Z5 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Sf3a1Q8K4Z5 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC19.17■□□□□ 0.66
Sf3a1Q8K4Z5 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC19.17■□□□□ 0.66
Sf3a1Q8K4Z5 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sf3a1Q8K4Z5 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sf3a1Q8K4Z5 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sf3a1Q8K4Z5 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sf3a1Q8K4Z5 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sf3a1Q8K4Z5 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sf3a1Q8K4Z5 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sf3a1Q8K4Z5 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Sf3a1Q8K4Z5 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Sf3a1Q8K4Z5 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC19.16■□□□□ 0.66
Sf3a1Q8K4Z5 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC19.16■□□□□ 0.66
Sf3a1Q8K4Z5 Gm4535-201ENSMUST00000182274 558 ntBASIC19.16■□□□□ 0.66
Sf3a1Q8K4Z5 Gm5864-201ENSMUST00000202263 970 ntBASIC19.16■□□□□ 0.66
Sf3a1Q8K4Z5 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC19.16■□□□□ 0.66
Sf3a1Q8K4Z5 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sf3a1Q8K4Z5 Gm10355-201ENSMUST00000097146 517 ntBASIC19.16■□□□□ 0.66
Sf3a1Q8K4Z5 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Sf3a1Q8K4Z5 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sf3a1Q8K4Z5 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sf3a1Q8K4Z5 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Sf3a1Q8K4Z5 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC19.16■□□□□ 0.66
Sf3a1Q8K4Z5 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Sf3a1Q8K4Z5 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sf3a1Q8K4Z5 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sf3a1Q8K4Z5 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Sf3a1Q8K4Z5 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sf3a1Q8K4Z5 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sf3a1Q8K4Z5 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC19.15■□□□□ 0.66
Sf3a1Q8K4Z5 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC19.15■□□□□ 0.66
Sf3a1Q8K4Z5 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sf3a1Q8K4Z5 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sf3a1Q8K4Z5 Gm11780-201ENSMUST00000136880 516 ntBASIC19.15■□□□□ 0.66
Sf3a1Q8K4Z5 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC19.15■□□□□ 0.66
Sf3a1Q8K4Z5 Mir8098-201ENSMUST00000184011 137 ntBASIC19.15■□□□□ 0.66
Sf3a1Q8K4Z5 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sf3a1Q8K4Z5 Gm6376-201ENSMUST00000209407 580 ntBASIC19.15■□□□□ 0.66
Sf3a1Q8K4Z5 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC19.15■□□□□ 0.66
Sf3a1Q8K4Z5 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sf3a1Q8K4Z5 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Sf3a1Q8K4Z5 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sf3a1Q8K4Z5 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
Sf3a1Q8K4Z5 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sf3a1Q8K4Z5 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sf3a1Q8K4Z5 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sf3a1Q8K4Z5 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sf3a1Q8K4Z5 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Sf3a1Q8K4Z5 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sf3a1Q8K4Z5 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC19.15■□□□□ 0.66
Sf3a1Q8K4Z5 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Sf3a1Q8K4Z5 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC19.14■□□□□ 0.65
Sf3a1Q8K4Z5 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sf3a1Q8K4Z5 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Sf3a1Q8K4Z5 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sf3a1Q8K4Z5 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sf3a1Q8K4Z5 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sf3a1Q8K4Z5 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sf3a1Q8K4Z5 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
Sf3a1Q8K4Z5 Gm11452-201ENSMUST00000122376 690 ntBASIC19.14■□□□□ 0.65
Sf3a1Q8K4Z5 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC19.14■□□□□ 0.65
Sf3a1Q8K4Z5 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Sf3a1Q8K4Z5 Gm28659-201ENSMUST00000188013 759 ntBASIC19.14■□□□□ 0.65
Sf3a1Q8K4Z5 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC19.14■□□□□ 0.65
Sf3a1Q8K4Z5 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.65
Sf3a1Q8K4Z5 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sf3a1Q8K4Z5 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms