Protein–RNA interactions for Protein: Q8JZS7

Hmgcll1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcll1Q8JZS7 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hmgcll1Q8JZS7 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hmgcll1Q8JZS7 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hmgcll1Q8JZS7 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.12■□□□□ 0.17
Hmgcll1Q8JZS7 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Hmgcll1Q8JZS7 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hmgcll1Q8JZS7 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hmgcll1Q8JZS7 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hmgcll1Q8JZS7 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hmgcll1Q8JZS7 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hmgcll1Q8JZS7 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hmgcll1Q8JZS7 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hmgcll1Q8JZS7 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hmgcll1Q8JZS7 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Hmgcll1Q8JZS7 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hmgcll1Q8JZS7 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hmgcll1Q8JZS7 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hmgcll1Q8JZS7 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Hmgcll1Q8JZS7 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hmgcll1Q8JZS7 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.11■□□□□ 0.17
Hmgcll1Q8JZS7 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hmgcll1Q8JZS7 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.11■□□□□ 0.17
Hmgcll1Q8JZS7 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.11■□□□□ 0.17
Hmgcll1Q8JZS7 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Hmgcll1Q8JZS7 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Hmgcll1Q8JZS7 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Hmgcll1Q8JZS7 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hmgcll1Q8JZS7 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hmgcll1Q8JZS7 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hmgcll1Q8JZS7 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hmgcll1Q8JZS7 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.11■□□□□ 0.17
Hmgcll1Q8JZS7 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hmgcll1Q8JZS7 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Hmgcll1Q8JZS7 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hmgcll1Q8JZS7 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hmgcll1Q8JZS7 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Hmgcll1Q8JZS7 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hmgcll1Q8JZS7 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hmgcll1Q8JZS7 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hmgcll1Q8JZS7 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hmgcll1Q8JZS7 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Hmgcll1Q8JZS7 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hmgcll1Q8JZS7 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hmgcll1Q8JZS7 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.1■□□□□ 0.17
Hmgcll1Q8JZS7 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Hmgcll1Q8JZS7 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hmgcll1Q8JZS7 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.1■□□□□ 0.17
Hmgcll1Q8JZS7 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Hmgcll1Q8JZS7 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Hmgcll1Q8JZS7 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC16.1■□□□□ 0.17
Hmgcll1Q8JZS7 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.1■□□□□ 0.17
Hmgcll1Q8JZS7 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hmgcll1Q8JZS7 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hmgcll1Q8JZS7 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hmgcll1Q8JZS7 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hmgcll1Q8JZS7 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hmgcll1Q8JZS7 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hmgcll1Q8JZS7 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hmgcll1Q8JZS7 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Hmgcll1Q8JZS7 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hmgcll1Q8JZS7 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hmgcll1Q8JZS7 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hmgcll1Q8JZS7 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hmgcll1Q8JZS7 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Hmgcll1Q8JZS7 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hmgcll1Q8JZS7 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hmgcll1Q8JZS7 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hmgcll1Q8JZS7 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.09■□□□□ 0.17
Hmgcll1Q8JZS7 Gm14722-201ENSMUST00000118943 689 ntBASIC16.09■□□□□ 0.17
Hmgcll1Q8JZS7 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hmgcll1Q8JZS7 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Hmgcll1Q8JZS7 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Hmgcll1Q8JZS7 Gm7787-201ENSMUST00000216858 688 ntBASIC16.09■□□□□ 0.17
Hmgcll1Q8JZS7 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Hmgcll1Q8JZS7 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Hmgcll1Q8JZS7 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hmgcll1Q8JZS7 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hmgcll1Q8JZS7 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Hmgcll1Q8JZS7 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hmgcll1Q8JZS7 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hmgcll1Q8JZS7 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Hmgcll1Q8JZS7 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hmgcll1Q8JZS7 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Hmgcll1Q8JZS7 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hmgcll1Q8JZS7 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hmgcll1Q8JZS7 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Hmgcll1Q8JZS7 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.08■□□□□ 0.17
Hmgcll1Q8JZS7 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Hmgcll1Q8JZS7 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Hmgcll1Q8JZS7 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hmgcll1Q8JZS7 Gm14494-201ENSMUST00000118786 435 ntBASIC16.08■□□□□ 0.16
Hmgcll1Q8JZS7 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.08■□□□□ 0.16
Hmgcll1Q8JZS7 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hmgcll1Q8JZS7 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hmgcll1Q8JZS7 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hmgcll1Q8JZS7 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hmgcll1Q8JZS7 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hmgcll1Q8JZS7 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hmgcll1Q8JZS7 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Hmgcll1Q8JZS7 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms