Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rab11fip3Q8CHD8 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rab11fip3Q8CHD8 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rab11fip3Q8CHD8 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Rab11fip3Q8CHD8 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rab11fip3Q8CHD8 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC20.24■□□□□ 0.83
Rab11fip3Q8CHD8 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Rab11fip3Q8CHD8 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rab11fip3Q8CHD8 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Rab11fip3Q8CHD8 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rab11fip3Q8CHD8 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rab11fip3Q8CHD8 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rab11fip3Q8CHD8 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Rab11fip3Q8CHD8 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rab11fip3Q8CHD8 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Rab11fip3Q8CHD8 AC157650.3-201ENSMUST00000225058 1476 ntBASIC20.24■□□□□ 0.83
Rab11fip3Q8CHD8 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rab11fip3Q8CHD8 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rab11fip3Q8CHD8 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rab11fip3Q8CHD8 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rab11fip3Q8CHD8 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rab11fip3Q8CHD8 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rab11fip3Q8CHD8 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rab11fip3Q8CHD8 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rab11fip3Q8CHD8 Gm24513-201ENSMUST00000174964 138 ntBASIC20.23■□□□□ 0.83
Rab11fip3Q8CHD8 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC20.23■□□□□ 0.83
Rab11fip3Q8CHD8 Gm38318-201ENSMUST00000195769 1706 ntBASIC20.23■□□□□ 0.83
Rab11fip3Q8CHD8 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC20.23■□□□□ 0.83
Rab11fip3Q8CHD8 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC20.23■□□□□ 0.83
Rab11fip3Q8CHD8 Gm44945-201ENSMUST00000206764 1187 ntBASIC20.23■□□□□ 0.83
Rab11fip3Q8CHD8 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rab11fip3Q8CHD8 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rab11fip3Q8CHD8 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rab11fip3Q8CHD8 Hivep3-201ENSMUST00000084306 2973 ntBASIC20.23■□□□□ 0.83
Rab11fip3Q8CHD8 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rab11fip3Q8CHD8 Gm13294-201ENSMUST00000121757 1330 ntBASIC20.23■□□□□ 0.83
Rab11fip3Q8CHD8 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Rab11fip3Q8CHD8 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Rab11fip3Q8CHD8 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rab11fip3Q8CHD8 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rab11fip3Q8CHD8 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rab11fip3Q8CHD8 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rab11fip3Q8CHD8 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rab11fip3Q8CHD8 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rab11fip3Q8CHD8 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rab11fip3Q8CHD8 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rab11fip3Q8CHD8 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC20.22■□□□□ 0.83
Rab11fip3Q8CHD8 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
Rab11fip3Q8CHD8 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC20.22■□□□□ 0.83
Rab11fip3Q8CHD8 Gm27702-201ENSMUST00000184512 56 ntBASIC20.22■□□□□ 0.83
Rab11fip3Q8CHD8 Gm27397-201ENSMUST00000184997 107 ntBASIC20.22■□□□□ 0.83
Rab11fip3Q8CHD8 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Rab11fip3Q8CHD8 AC159295.1-201ENSMUST00000225326 940 ntBASIC20.22■□□□□ 0.83
Rab11fip3Q8CHD8 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rab11fip3Q8CHD8 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rab11fip3Q8CHD8 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rab11fip3Q8CHD8 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rab11fip3Q8CHD8 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rab11fip3Q8CHD8 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rab11fip3Q8CHD8 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rab11fip3Q8CHD8 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rab11fip3Q8CHD8 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rab11fip3Q8CHD8 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rab11fip3Q8CHD8 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rab11fip3Q8CHD8 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rab11fip3Q8CHD8 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rab11fip3Q8CHD8 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rab11fip3Q8CHD8 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC20.21■□□□□ 0.83
Rab11fip3Q8CHD8 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rab11fip3Q8CHD8 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC20.21■□□□□ 0.83
Rab11fip3Q8CHD8 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC20.21■□□□□ 0.83
Rab11fip3Q8CHD8 Gm7229-201ENSMUST00000214719 1007 ntBASIC20.21■□□□□ 0.83
Rab11fip3Q8CHD8 AC225888.1-201ENSMUST00000227184 728 ntBASIC20.21■□□□□ 0.83
Rab11fip3Q8CHD8 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Rab11fip3Q8CHD8 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rab11fip3Q8CHD8 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC20.21■□□□□ 0.83
Rab11fip3Q8CHD8 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rab11fip3Q8CHD8 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rab11fip3Q8CHD8 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rab11fip3Q8CHD8 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Rab11fip3Q8CHD8 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rab11fip3Q8CHD8 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rab11fip3Q8CHD8 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rab11fip3Q8CHD8 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rab11fip3Q8CHD8 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rab11fip3Q8CHD8 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC20.2■□□□□ 0.82
Rab11fip3Q8CHD8 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rab11fip3Q8CHD8 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rab11fip3Q8CHD8 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rab11fip3Q8CHD8 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rab11fip3Q8CHD8 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rab11fip3Q8CHD8 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rab11fip3Q8CHD8 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC20.2■□□□□ 0.82
Rab11fip3Q8CHD8 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rab11fip3Q8CHD8 Gm11453-201ENSMUST00000117318 1007 ntBASIC20.2■□□□□ 0.82
Rab11fip3Q8CHD8 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC20.2■□□□□ 0.82
Rab11fip3Q8CHD8 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rab11fip3Q8CHD8 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rab11fip3Q8CHD8 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rab11fip3Q8CHD8 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms