Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Sox30Q8CGW4 Gm15794-201ENSMUST00000120182 631 ntBASIC17.12■□□□□ 0.33
Sox30Q8CGW4 Gm6623-201ENSMUST00000173570 544 ntBASIC17.12■□□□□ 0.33
Sox30Q8CGW4 Gm6345-202ENSMUST00000180900 204 ntBASIC17.12■□□□□ 0.33
Sox30Q8CGW4 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sox30Q8CGW4 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sox30Q8CGW4 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Sox30Q8CGW4 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sox30Q8CGW4 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Sox30Q8CGW4 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sox30Q8CGW4 Gm45504-201ENSMUST00000211407 2107 ntBASIC17.12■□□□□ 0.33
Sox30Q8CGW4 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sox30Q8CGW4 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Sox30Q8CGW4 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sox30Q8CGW4 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sox30Q8CGW4 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sox30Q8CGW4 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC17.12■□□□□ 0.33
Sox30Q8CGW4 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sox30Q8CGW4 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sox30Q8CGW4 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sox30Q8CGW4 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sox30Q8CGW4 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox30Q8CGW4 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox30Q8CGW4 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.11■□□□□ 0.33
Sox30Q8CGW4 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
Sox30Q8CGW4 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sox30Q8CGW4 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.11■□□□□ 0.33
Sox30Q8CGW4 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Sox30Q8CGW4 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox30Q8CGW4 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sox30Q8CGW4 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox30Q8CGW4 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox30Q8CGW4 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox30Q8CGW4 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox30Q8CGW4 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox30Q8CGW4 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox30Q8CGW4 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox30Q8CGW4 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox30Q8CGW4 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox30Q8CGW4 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox30Q8CGW4 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Sox30Q8CGW4 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox30Q8CGW4 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.1■□□□□ 0.33
Sox30Q8CGW4 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox30Q8CGW4 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox30Q8CGW4 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.1■□□□□ 0.33
Sox30Q8CGW4 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sox30Q8CGW4 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox30Q8CGW4 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox30Q8CGW4 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sox30Q8CGW4 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox30Q8CGW4 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox30Q8CGW4 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox30Q8CGW4 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox30Q8CGW4 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox30Q8CGW4 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Sox30Q8CGW4 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Sox30Q8CGW4 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox30Q8CGW4 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sox30Q8CGW4 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox30Q8CGW4 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox30Q8CGW4 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.09■□□□□ 0.33
Sox30Q8CGW4 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox30Q8CGW4 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox30Q8CGW4 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox30Q8CGW4 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Sox30Q8CGW4 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox30Q8CGW4 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox30Q8CGW4 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sox30Q8CGW4 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox30Q8CGW4 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox30Q8CGW4 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox30Q8CGW4 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sox30Q8CGW4 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sox30Q8CGW4 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox30Q8CGW4 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Sox30Q8CGW4 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Sox30Q8CGW4 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox30Q8CGW4 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox30Q8CGW4 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox30Q8CGW4 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sox30Q8CGW4 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sox30Q8CGW4 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Sox30Q8CGW4 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sox30Q8CGW4 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sox30Q8CGW4 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Sox30Q8CGW4 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Sox30Q8CGW4 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Sox30Q8CGW4 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Sox30Q8CGW4 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.08■□□□□ 0.33
Sox30Q8CGW4 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.08■□□□□ 0.33
Sox30Q8CGW4 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sox30Q8CGW4 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox30Q8CGW4 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox30Q8CGW4 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Sox30Q8CGW4 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox30Q8CGW4 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.08■□□□□ 0.32
Sox30Q8CGW4 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Sox30Q8CGW4 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.08■□□□□ 0.32
Sox30Q8CGW4 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms