Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rdh1Q8CGV4 Gm18489-201ENSMUST00000172565 551 ntBASIC15.2■□□□□ 0.02
Rdh1Q8CGV4 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Rdh1Q8CGV4 Gm37935-201ENSMUST00000192012 982 ntBASIC15.2■□□□□ 0.02
Rdh1Q8CGV4 Gm9682-201ENSMUST00000197505 556 ntBASIC15.2■□□□□ 0.02
Rdh1Q8CGV4 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rdh1Q8CGV4 Gm7787-201ENSMUST00000216858 688 ntBASIC15.2■□□□□ 0.02
Rdh1Q8CGV4 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rdh1Q8CGV4 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.2■□□□□ 0.02
Rdh1Q8CGV4 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Rdh1Q8CGV4 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Rdh1Q8CGV4 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rdh1Q8CGV4 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.2■□□□□ 0.02
Rdh1Q8CGV4 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rdh1Q8CGV4 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rdh1Q8CGV4 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rdh1Q8CGV4 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rdh1Q8CGV4 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rdh1Q8CGV4 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rdh1Q8CGV4 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rdh1Q8CGV4 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.2■□□□□ 0.02
Rdh1Q8CGV4 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.2■□□□□ 0.02
Rdh1Q8CGV4 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rdh1Q8CGV4 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rdh1Q8CGV4 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Rdh1Q8CGV4 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rdh1Q8CGV4 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rdh1Q8CGV4 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh1Q8CGV4 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh1Q8CGV4 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh1Q8CGV4 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Rdh1Q8CGV4 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh1Q8CGV4 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.19■□□□□ 0.02
Rdh1Q8CGV4 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Rdh1Q8CGV4 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh1Q8CGV4 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh1Q8CGV4 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rdh1Q8CGV4 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh1Q8CGV4 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.19■□□□□ 0.02
Rdh1Q8CGV4 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh1Q8CGV4 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh1Q8CGV4 Gm14494-201ENSMUST00000118786 435 ntBASIC15.19■□□□□ 0.02
Rdh1Q8CGV4 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.19■□□□□ 0.02
Rdh1Q8CGV4 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh1Q8CGV4 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.19■□□□□ 0.02
Rdh1Q8CGV4 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh1Q8CGV4 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh1Q8CGV4 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.19■□□□□ 0.02
Rdh1Q8CGV4 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh1Q8CGV4 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Rdh1Q8CGV4 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Rdh1Q8CGV4 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh1Q8CGV4 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh1Q8CGV4 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh1Q8CGV4 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Rdh1Q8CGV4 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh1Q8CGV4 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Rdh1Q8CGV4 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh1Q8CGV4 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh1Q8CGV4 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Rdh1Q8CGV4 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh1Q8CGV4 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rdh1Q8CGV4 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rdh1Q8CGV4 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rdh1Q8CGV4 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
Rdh1Q8CGV4 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rdh1Q8CGV4 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rdh1Q8CGV4 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rdh1Q8CGV4 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rdh1Q8CGV4 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rdh1Q8CGV4 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rdh1Q8CGV4 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rdh1Q8CGV4 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.18■□□□□ 0.02
Rdh1Q8CGV4 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.18■□□□□ 0.02
Rdh1Q8CGV4 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.18■□□□□ 0.02
Rdh1Q8CGV4 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Rdh1Q8CGV4 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.18■□□□□ 0.02
Rdh1Q8CGV4 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rdh1Q8CGV4 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.18■□□□□ 0.02
Rdh1Q8CGV4 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rdh1Q8CGV4 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rdh1Q8CGV4 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.18■□□□□ 0.02
Rdh1Q8CGV4 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rdh1Q8CGV4 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rdh1Q8CGV4 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rdh1Q8CGV4 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.18■□□□□ 0.02
Rdh1Q8CGV4 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rdh1Q8CGV4 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rdh1Q8CGV4 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rdh1Q8CGV4 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rdh1Q8CGV4 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rdh1Q8CGV4 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rdh1Q8CGV4 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rdh1Q8CGV4 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rdh1Q8CGV4 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rdh1Q8CGV4 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rdh1Q8CGV4 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Rdh1Q8CGV4 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rdh1Q8CGV4 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rdh1Q8CGV4 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms