Protein–RNA interactions for Protein: Q8CGP4

Hist1h2aa, Histone H2A, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2aaQ8CGP4 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hist1h2aaQ8CGP4 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hist1h2aaQ8CGP4 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hist1h2aaQ8CGP4 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hist1h2aaQ8CGP4 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Hist1h2aaQ8CGP4 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Hist1h2aaQ8CGP4 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hist1h2aaQ8CGP4 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hist1h2aaQ8CGP4 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hist1h2aaQ8CGP4 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hist1h2aaQ8CGP4 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hist1h2aaQ8CGP4 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Hist1h2aaQ8CGP4 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.77□□□□□ -0.05
Hist1h2aaQ8CGP4 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Hist1h2aaQ8CGP4 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Hist1h2aaQ8CGP4 Gm27357-201ENSMUST00000183754 135 ntBASIC14.77□□□□□ -0.05
Hist1h2aaQ8CGP4 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hist1h2aaQ8CGP4 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Hist1h2aaQ8CGP4 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Hist1h2aaQ8CGP4 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Hist1h2aaQ8CGP4 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.77□□□□□ -0.05
Hist1h2aaQ8CGP4 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hist1h2aaQ8CGP4 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Hist1h2aaQ8CGP4 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.77□□□□□ -0.05
Hist1h2aaQ8CGP4 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.77□□□□□ -0.05
Hist1h2aaQ8CGP4 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hist1h2aaQ8CGP4 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Hist1h2aaQ8CGP4 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Hist1h2aaQ8CGP4 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.77□□□□□ -0.05
Hist1h2aaQ8CGP4 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hist1h2aaQ8CGP4 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hist1h2aaQ8CGP4 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hist1h2aaQ8CGP4 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hist1h2aaQ8CGP4 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Hist1h2aaQ8CGP4 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hist1h2aaQ8CGP4 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Hist1h2aaQ8CGP4 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hist1h2aaQ8CGP4 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hist1h2aaQ8CGP4 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hist1h2aaQ8CGP4 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.76□□□□□ -0.05
Hist1h2aaQ8CGP4 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hist1h2aaQ8CGP4 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hist1h2aaQ8CGP4 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hist1h2aaQ8CGP4 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.76□□□□□ -0.05
Hist1h2aaQ8CGP4 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Hist1h2aaQ8CGP4 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.76□□□□□ -0.05
Hist1h2aaQ8CGP4 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hist1h2aaQ8CGP4 Gm6257-201ENSMUST00000163864 910 ntBASIC14.76□□□□□ -0.05
Hist1h2aaQ8CGP4 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Hist1h2aaQ8CGP4 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Hist1h2aaQ8CGP4 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Hist1h2aaQ8CGP4 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.76□□□□□ -0.05
Hist1h2aaQ8CGP4 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hist1h2aaQ8CGP4 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hist1h2aaQ8CGP4 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hist1h2aaQ8CGP4 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hist1h2aaQ8CGP4 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hist1h2aaQ8CGP4 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hist1h2aaQ8CGP4 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hist1h2aaQ8CGP4 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hist1h2aaQ8CGP4 Prob1-201ENSMUST00000097619 3021 ntBASIC14.76□□□□□ -0.05
Hist1h2aaQ8CGP4 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hist1h2aaQ8CGP4 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hist1h2aaQ8CGP4 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hist1h2aaQ8CGP4 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Hist1h2aaQ8CGP4 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hist1h2aaQ8CGP4 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hist1h2aaQ8CGP4 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Hist1h2aaQ8CGP4 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hist1h2aaQ8CGP4 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.75□□□□□ -0.05
Hist1h2aaQ8CGP4 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.75□□□□□ -0.05
Hist1h2aaQ8CGP4 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hist1h2aaQ8CGP4 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hist1h2aaQ8CGP4 Dancr-204ENSMUST00000132389 2347 ntBASIC14.75□□□□□ -0.05
Hist1h2aaQ8CGP4 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hist1h2aaQ8CGP4 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hist1h2aaQ8CGP4 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Hist1h2aaQ8CGP4 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.75□□□□□ -0.05
Hist1h2aaQ8CGP4 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hist1h2aaQ8CGP4 Gm15165-201ENSMUST00000118140 502 ntBASIC14.75□□□□□ -0.05
Hist1h2aaQ8CGP4 Gm25406-201ENSMUST00000157599 105 ntBASIC14.75□□□□□ -0.05
Hist1h2aaQ8CGP4 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Hist1h2aaQ8CGP4 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.75□□□□□ -0.05
Hist1h2aaQ8CGP4 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.75□□□□□ -0.05
Hist1h2aaQ8CGP4 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hist1h2aaQ8CGP4 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hist1h2aaQ8CGP4 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Hist1h2aaQ8CGP4 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hist1h2aaQ8CGP4 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hist1h2aaQ8CGP4 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Hist1h2aaQ8CGP4 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Hist1h2aaQ8CGP4 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hist1h2aaQ8CGP4 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hist1h2aaQ8CGP4 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hist1h2aaQ8CGP4 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hist1h2aaQ8CGP4 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hist1h2aaQ8CGP4 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hist1h2aaQ8CGP4 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hist1h2aaQ8CGP4 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hist1h2aaQ8CGP4 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms