Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smc4Q8CG47 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smc4Q8CG47 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smc4Q8CG47 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Smc4Q8CG47 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Smc4Q8CG47 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Smc4Q8CG47 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC19.27■□□□□ 0.68
Smc4Q8CG47 AC131586.3-201ENSMUST00000228355 1367 ntBASIC19.27■□□□□ 0.68
Smc4Q8CG47 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smc4Q8CG47 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smc4Q8CG47 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC19.27■□□□□ 0.67
Smc4Q8CG47 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smc4Q8CG47 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smc4Q8CG47 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Smc4Q8CG47 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smc4Q8CG47 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Smc4Q8CG47 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smc4Q8CG47 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Smc4Q8CG47 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smc4Q8CG47 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Smc4Q8CG47 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smc4Q8CG47 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC19.26■□□□□ 0.67
Smc4Q8CG47 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Smc4Q8CG47 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC19.26■□□□□ 0.67
Smc4Q8CG47 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC19.26■□□□□ 0.67
Smc4Q8CG47 Gm9682-201ENSMUST00000197505 556 ntBASIC19.26■□□□□ 0.67
Smc4Q8CG47 Gm43073-201ENSMUST00000198200 1189 ntBASIC19.26■□□□□ 0.67
Smc4Q8CG47 Gm45683-201ENSMUST00000210825 1247 ntBASIC19.26■□□□□ 0.67
Smc4Q8CG47 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Smc4Q8CG47 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smc4Q8CG47 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Smc4Q8CG47 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smc4Q8CG47 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smc4Q8CG47 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smc4Q8CG47 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smc4Q8CG47 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smc4Q8CG47 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Smc4Q8CG47 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Smc4Q8CG47 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smc4Q8CG47 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smc4Q8CG47 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smc4Q8CG47 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smc4Q8CG47 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC19.25■□□□□ 0.67
Smc4Q8CG47 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smc4Q8CG47 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smc4Q8CG47 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smc4Q8CG47 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smc4Q8CG47 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smc4Q8CG47 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC19.25■□□□□ 0.67
Smc4Q8CG47 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Smc4Q8CG47 Gm37935-201ENSMUST00000192012 982 ntBASIC19.25■□□□□ 0.67
Smc4Q8CG47 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC19.25■□□□□ 0.67
Smc4Q8CG47 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smc4Q8CG47 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Smc4Q8CG47 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smc4Q8CG47 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smc4Q8CG47 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smc4Q8CG47 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smc4Q8CG47 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smc4Q8CG47 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smc4Q8CG47 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Smc4Q8CG47 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smc4Q8CG47 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC19.24■□□□□ 0.67
Smc4Q8CG47 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Smc4Q8CG47 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smc4Q8CG47 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC19.24■□□□□ 0.67
Smc4Q8CG47 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC19.24■□□□□ 0.67
Smc4Q8CG47 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Smc4Q8CG47 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smc4Q8CG47 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Smc4Q8CG47 Gm2213-201ENSMUST00000197485 688 ntBASIC19.24■□□□□ 0.67
Smc4Q8CG47 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC19.24■□□□□ 0.67
Smc4Q8CG47 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC19.24■□□□□ 0.67
Smc4Q8CG47 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Smc4Q8CG47 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smc4Q8CG47 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smc4Q8CG47 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smc4Q8CG47 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smc4Q8CG47 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc4Q8CG47 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smc4Q8CG47 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smc4Q8CG47 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc4Q8CG47 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc4Q8CG47 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc4Q8CG47 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Smc4Q8CG47 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Smc4Q8CG47 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Smc4Q8CG47 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC19.23■□□□□ 0.67
Smc4Q8CG47 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC19.23■□□□□ 0.67
Smc4Q8CG47 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC19.23■□□□□ 0.67
Smc4Q8CG47 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc4Q8CG47 Gm7286-201ENSMUST00000182691 1007 ntBASIC19.23■□□□□ 0.67
Smc4Q8CG47 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC19.23■□□□□ 0.67
Smc4Q8CG47 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc4Q8CG47 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Smc4Q8CG47 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Smc4Q8CG47 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC19.23■□□□□ 0.67
Smc4Q8CG47 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc4Q8CG47 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc4Q8CG47 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms