Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim52Q8CDV4 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC19.26■□□□□ 0.67
Trim52Q8CDV4 Gm9385-201ENSMUST00000117563 472 ntBASIC19.26■□□□□ 0.67
Trim52Q8CDV4 Gm11745-201ENSMUST00000121669 448 ntBASIC19.26■□□□□ 0.67
Trim52Q8CDV4 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC19.26■□□□□ 0.67
Trim52Q8CDV4 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC19.26■□□□□ 0.67
Trim52Q8CDV4 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC19.26■□□□□ 0.67
Trim52Q8CDV4 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim52Q8CDV4 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim52Q8CDV4 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim52Q8CDV4 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim52Q8CDV4 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim52Q8CDV4 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim52Q8CDV4 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim52Q8CDV4 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim52Q8CDV4 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC19.25■□□□□ 0.67
Trim52Q8CDV4 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC19.25■□□□□ 0.67
Trim52Q8CDV4 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim52Q8CDV4 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim52Q8CDV4 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim52Q8CDV4 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim52Q8CDV4 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim52Q8CDV4 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Trim52Q8CDV4 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Trim52Q8CDV4 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim52Q8CDV4 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim52Q8CDV4 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim52Q8CDV4 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim52Q8CDV4 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim52Q8CDV4 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC19.25■□□□□ 0.67
Trim52Q8CDV4 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC19.25■□□□□ 0.67
Trim52Q8CDV4 Gm2272-201ENSMUST00000194903 582 ntBASIC19.25■□□□□ 0.67
Trim52Q8CDV4 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim52Q8CDV4 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim52Q8CDV4 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim52Q8CDV4 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim52Q8CDV4 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim52Q8CDV4 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim52Q8CDV4 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim52Q8CDV4 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim52Q8CDV4 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Trim52Q8CDV4 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim52Q8CDV4 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim52Q8CDV4 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim52Q8CDV4 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Trim52Q8CDV4 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim52Q8CDV4 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim52Q8CDV4 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Trim52Q8CDV4 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Trim52Q8CDV4 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim52Q8CDV4 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC19.24■□□□□ 0.67
Trim52Q8CDV4 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC19.24■□□□□ 0.67
Trim52Q8CDV4 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC19.24■□□□□ 0.67
Trim52Q8CDV4 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC19.24■□□□□ 0.67
Trim52Q8CDV4 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC19.24■□□□□ 0.67
Trim52Q8CDV4 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Trim52Q8CDV4 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim52Q8CDV4 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC19.24■□□□□ 0.67
Trim52Q8CDV4 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
Trim52Q8CDV4 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Trim52Q8CDV4 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim52Q8CDV4 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim52Q8CDV4 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim52Q8CDV4 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim52Q8CDV4 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim52Q8CDV4 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim52Q8CDV4 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.23■□□□□ 0.67
Trim52Q8CDV4 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim52Q8CDV4 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim52Q8CDV4 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim52Q8CDV4 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Trim52Q8CDV4 Gm15920-201ENSMUST00000118998 402 ntBASIC19.23■□□□□ 0.67
Trim52Q8CDV4 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Trim52Q8CDV4 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Trim52Q8CDV4 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim52Q8CDV4 Gm42473-201ENSMUST00000201056 2291 ntBASIC19.23■□□□□ 0.67
Trim52Q8CDV4 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim52Q8CDV4 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim52Q8CDV4 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim52Q8CDV4 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim52Q8CDV4 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Trim52Q8CDV4 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim52Q8CDV4 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim52Q8CDV4 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim52Q8CDV4 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim52Q8CDV4 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim52Q8CDV4 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim52Q8CDV4 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Trim52Q8CDV4 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Trim52Q8CDV4 Auts2-212ENSMUST00000178555 309 ntBASIC19.22■□□□□ 0.67
Trim52Q8CDV4 Gm5628-201ENSMUST00000222318 1049 ntBASIC19.22■□□□□ 0.67
Trim52Q8CDV4 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim52Q8CDV4 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Trim52Q8CDV4 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim52Q8CDV4 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim52Q8CDV4 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC19.22■□□□□ 0.67
Trim52Q8CDV4 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim52Q8CDV4 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Trim52Q8CDV4 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim52Q8CDV4 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms