Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Uba3Q8C878 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Uba3Q8C878 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Uba3Q8C878 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.51■□□□□ 0.23
Uba3Q8C878 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Uba3Q8C878 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Uba3Q8C878 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Uba3Q8C878 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.51■□□□□ 0.23
Uba3Q8C878 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Uba3Q8C878 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Uba3Q8C878 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Uba3Q8C878 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Uba3Q8C878 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Uba3Q8C878 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Uba3Q8C878 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Uba3Q8C878 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.5■□□□□ 0.23
Uba3Q8C878 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Uba3Q8C878 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Uba3Q8C878 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Uba3Q8C878 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Uba3Q8C878 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Uba3Q8C878 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Uba3Q8C878 Gm13418-201ENSMUST00000119097 944 ntBASIC16.5■□□□□ 0.23
Uba3Q8C878 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.5■□□□□ 0.23
Uba3Q8C878 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.5■□□□□ 0.23
Uba3Q8C878 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Uba3Q8C878 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.5■□□□□ 0.23
Uba3Q8C878 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Uba3Q8C878 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Uba3Q8C878 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Uba3Q8C878 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Uba3Q8C878 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Uba3Q8C878 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Uba3Q8C878 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Uba3Q8C878 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Uba3Q8C878 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Uba3Q8C878 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Uba3Q8C878 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Uba3Q8C878 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Uba3Q8C878 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.5■□□□□ 0.23
Uba3Q8C878 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Uba3Q8C878 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Uba3Q8C878 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Uba3Q8C878 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Uba3Q8C878 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Uba3Q8C878 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Uba3Q8C878 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Uba3Q8C878 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.49■□□□□ 0.23
Uba3Q8C878 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.49■□□□□ 0.23
Uba3Q8C878 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Uba3Q8C878 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Uba3Q8C878 Gm4535-201ENSMUST00000182274 558 ntBASIC16.49■□□□□ 0.23
Uba3Q8C878 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Uba3Q8C878 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Uba3Q8C878 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Uba3Q8C878 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Uba3Q8C878 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Uba3Q8C878 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Uba3Q8C878 Gm10355-201ENSMUST00000097146 517 ntBASIC16.49■□□□□ 0.23
Uba3Q8C878 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Uba3Q8C878 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Uba3Q8C878 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Uba3Q8C878 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Uba3Q8C878 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Uba3Q8C878 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.49■□□□□ 0.23
Uba3Q8C878 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Uba3Q8C878 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Uba3Q8C878 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Uba3Q8C878 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.49■□□□□ 0.23
Uba3Q8C878 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Uba3Q8C878 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Uba3Q8C878 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Uba3Q8C878 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Uba3Q8C878 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Uba3Q8C878 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Uba3Q8C878 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.48■□□□□ 0.23
Uba3Q8C878 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Uba3Q8C878 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.48■□□□□ 0.23
Uba3Q8C878 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Uba3Q8C878 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Uba3Q8C878 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Uba3Q8C878 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Uba3Q8C878 Gm13884-201ENSMUST00000118103 829 ntBASIC16.48■□□□□ 0.23
Uba3Q8C878 Gm11780-201ENSMUST00000136880 516 ntBASIC16.48■□□□□ 0.23
Uba3Q8C878 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.48■□□□□ 0.23
Uba3Q8C878 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.48■□□□□ 0.23
Uba3Q8C878 Mir8098-201ENSMUST00000184011 137 ntBASIC16.48■□□□□ 0.23
Uba3Q8C878 Gm28659-201ENSMUST00000188013 759 ntBASIC16.48■□□□□ 0.23
Uba3Q8C878 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Uba3Q8C878 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.48■□□□□ 0.23
Uba3Q8C878 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Uba3Q8C878 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Uba3Q8C878 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Uba3Q8C878 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.48■□□□□ 0.23
Uba3Q8C878 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.48■□□□□ 0.23
Uba3Q8C878 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Uba3Q8C878 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Uba3Q8C878 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Uba3Q8C878 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Uba3Q8C878 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms