Protein–RNA interactions for Protein: Q8C6M1

Usp20, Ubiquitin carboxyl-terminal hydrolase 20, mousemouse

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp20Q8C6M1 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp20Q8C6M1 Gm10175-201ENSMUST00000086013 645 ntBASIC17.31■□□□□ 0.36
Usp20Q8C6M1 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Usp20Q8C6M1 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp20Q8C6M1 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp20Q8C6M1 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Usp20Q8C6M1 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Usp20Q8C6M1 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.31■□□□□ 0.36
Usp20Q8C6M1 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp20Q8C6M1 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp20Q8C6M1 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp20Q8C6M1 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp20Q8C6M1 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Usp20Q8C6M1 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Usp20Q8C6M1 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Usp20Q8C6M1 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp20Q8C6M1 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp20Q8C6M1 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp20Q8C6M1 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.3■□□□□ 0.36
Usp20Q8C6M1 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.3■□□□□ 0.36
Usp20Q8C6M1 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Usp20Q8C6M1 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.3■□□□□ 0.36
Usp20Q8C6M1 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp20Q8C6M1 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp20Q8C6M1 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp20Q8C6M1 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Usp20Q8C6M1 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp20Q8C6M1 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Usp20Q8C6M1 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp20Q8C6M1 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp20Q8C6M1 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.3■□□□□ 0.36
Usp20Q8C6M1 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Usp20Q8C6M1 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp20Q8C6M1 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp20Q8C6M1 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Usp20Q8C6M1 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp20Q8C6M1 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp20Q8C6M1 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
Usp20Q8C6M1 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Usp20Q8C6M1 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp20Q8C6M1 Gm11764-201ENSMUST00000120221 623 ntBASIC17.29■□□□□ 0.36
Usp20Q8C6M1 Mir3113-201ENSMUST00000175478 76 ntBASIC17.29■□□□□ 0.36
Usp20Q8C6M1 Gm27300-201ENSMUST00000184085 97 ntBASIC17.29■□□□□ 0.36
Usp20Q8C6M1 Gm27335-201ENSMUST00000184758 97 ntBASIC17.29■□□□□ 0.36
Usp20Q8C6M1 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Usp20Q8C6M1 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.29■□□□□ 0.36
Usp20Q8C6M1 AC131709.1-201ENSMUST00000224731 1180 ntBASIC17.29■□□□□ 0.36
Usp20Q8C6M1 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.29■□□□□ 0.36
Usp20Q8C6M1 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Usp20Q8C6M1 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Usp20Q8C6M1 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.29■□□□□ 0.36
Usp20Q8C6M1 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp20Q8C6M1 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Usp20Q8C6M1 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp20Q8C6M1 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Usp20Q8C6M1 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp20Q8C6M1 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Usp20Q8C6M1 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp20Q8C6M1 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp20Q8C6M1 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp20Q8C6M1 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.28■□□□□ 0.36
Usp20Q8C6M1 Gm5648-201ENSMUST00000122244 1587 ntBASIC17.28■□□□□ 0.36
Usp20Q8C6M1 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp20Q8C6M1 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.28■□□□□ 0.36
Usp20Q8C6M1 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.28■□□□□ 0.36
Usp20Q8C6M1 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp20Q8C6M1 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp20Q8C6M1 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.28■□□□□ 0.36
Usp20Q8C6M1 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp20Q8C6M1 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.28■□□□□ 0.36
Usp20Q8C6M1 Gm11185-201ENSMUST00000117732 1007 ntBASIC17.28■□□□□ 0.36
Usp20Q8C6M1 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC17.28■□□□□ 0.36
Usp20Q8C6M1 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp20Q8C6M1 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp20Q8C6M1 Gm7229-201ENSMUST00000214719 1007 ntBASIC17.28■□□□□ 0.36
Usp20Q8C6M1 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.28■□□□□ 0.36
Usp20Q8C6M1 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp20Q8C6M1 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp20Q8C6M1 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Usp20Q8C6M1 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp20Q8C6M1 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Usp20Q8C6M1 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp20Q8C6M1 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp20Q8C6M1 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp20Q8C6M1 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Usp20Q8C6M1 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp20Q8C6M1 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp20Q8C6M1 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp20Q8C6M1 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp20Q8C6M1 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
Usp20Q8C6M1 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Usp20Q8C6M1 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC17.27■□□□□ 0.36
Usp20Q8C6M1 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC17.27■□□□□ 0.36
Usp20Q8C6M1 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.27■□□□□ 0.36
Usp20Q8C6M1 Gm8344-201ENSMUST00000119813 856 ntBASIC17.27■□□□□ 0.36
Usp20Q8C6M1 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp20Q8C6M1 Gm37153-201ENSMUST00000193637 231 ntBASIC17.27■□□□□ 0.36
Usp20Q8C6M1 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Usp20Q8C6M1 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp20Q8C6M1 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms