Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rft1Q8C3B8 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rft1Q8C3B8 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Rft1Q8C3B8 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rft1Q8C3B8 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rft1Q8C3B8 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rft1Q8C3B8 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.02□□□□□ -0.16
Rft1Q8C3B8 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.02□□□□□ -0.16
Rft1Q8C3B8 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Rft1Q8C3B8 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rft1Q8C3B8 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.02□□□□□ -0.16
Rft1Q8C3B8 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Rft1Q8C3B8 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rft1Q8C3B8 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Rft1Q8C3B8 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Rft1Q8C3B8 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rft1Q8C3B8 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.02□□□□□ -0.17
Rft1Q8C3B8 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.02□□□□□ -0.17
Rft1Q8C3B8 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Rft1Q8C3B8 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rft1Q8C3B8 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rft1Q8C3B8 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rft1Q8C3B8 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rft1Q8C3B8 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rft1Q8C3B8 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Rft1Q8C3B8 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rft1Q8C3B8 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rft1Q8C3B8 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rft1Q8C3B8 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rft1Q8C3B8 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.02□□□□□ -0.17
Rft1Q8C3B8 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rft1Q8C3B8 Phf7-203ENSMUST00000226565 1971 ntBASIC14.02□□□□□ -0.17
Rft1Q8C3B8 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rft1Q8C3B8 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rft1Q8C3B8 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rft1Q8C3B8 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.01□□□□□ -0.17
Rft1Q8C3B8 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rft1Q8C3B8 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rft1Q8C3B8 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rft1Q8C3B8 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Rft1Q8C3B8 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rft1Q8C3B8 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rft1Q8C3B8 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.01□□□□□ -0.17
Rft1Q8C3B8 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rft1Q8C3B8 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Rft1Q8C3B8 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rft1Q8C3B8 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rft1Q8C3B8 Gm13186-201ENSMUST00000118031 316 ntBASIC14.01□□□□□ -0.17
Rft1Q8C3B8 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rft1Q8C3B8 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.01□□□□□ -0.17
Rft1Q8C3B8 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.01□□□□□ -0.17
Rft1Q8C3B8 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rft1Q8C3B8 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rft1Q8C3B8 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rft1Q8C3B8 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rft1Q8C3B8 Sybu-209ENSMUST00000228639 4113 ntBASIC14.01□□□□□ -0.17
Rft1Q8C3B8 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rft1Q8C3B8 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rft1Q8C3B8 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rft1Q8C3B8 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rft1Q8C3B8 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rft1Q8C3B8 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rft1Q8C3B8 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rft1Q8C3B8 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rft1Q8C3B8 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rft1Q8C3B8 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rft1Q8C3B8 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rft1Q8C3B8 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rft1Q8C3B8 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rft1Q8C3B8 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Rft1Q8C3B8 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14□□□□□ -0.17
Rft1Q8C3B8 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14□□□□□ -0.17
Rft1Q8C3B8 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
Rft1Q8C3B8 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rft1Q8C3B8 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rft1Q8C3B8 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rft1Q8C3B8 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rft1Q8C3B8 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rft1Q8C3B8 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rft1Q8C3B8 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rft1Q8C3B8 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14□□□□□ -0.17
Rft1Q8C3B8 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Rft1Q8C3B8 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rft1Q8C3B8 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rft1Q8C3B8 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rft1Q8C3B8 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rft1Q8C3B8 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rft1Q8C3B8 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rft1Q8C3B8 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Rft1Q8C3B8 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Rft1Q8C3B8 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rft1Q8C3B8 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Rft1Q8C3B8 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Rft1Q8C3B8 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rft1Q8C3B8 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rft1Q8C3B8 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rft1Q8C3B8 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rft1Q8C3B8 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rft1Q8C3B8 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rft1Q8C3B8 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms