Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC19.25■□□□□ 0.67
Ptcd1Q8C2E4 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ptcd1Q8C2E4 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ptcd1Q8C2E4 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ptcd1Q8C2E4 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC19.24■□□□□ 0.67
Ptcd1Q8C2E4 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ptcd1Q8C2E4 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ptcd1Q8C2E4 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ptcd1Q8C2E4 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Ptcd1Q8C2E4 AC157650.3-201ENSMUST00000225058 1476 ntBASIC19.24■□□□□ 0.67
Ptcd1Q8C2E4 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Ptcd1Q8C2E4 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ptcd1Q8C2E4 Gm13365-201ENSMUST00000121188 973 ntBASIC19.24■□□□□ 0.67
Ptcd1Q8C2E4 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ptcd1Q8C2E4 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Ptcd1Q8C2E4 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC19.24■□□□□ 0.67
Ptcd1Q8C2E4 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ptcd1Q8C2E4 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ptcd1Q8C2E4 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ptcd1Q8C2E4 Hivep3-201ENSMUST00000084306 2973 ntBASIC19.24■□□□□ 0.67
Ptcd1Q8C2E4 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC19.24■□□□□ 0.67
Ptcd1Q8C2E4 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ptcd1Q8C2E4 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ptcd1Q8C2E4 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ptcd1Q8C2E4 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Ptcd1Q8C2E4 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ptcd1Q8C2E4 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ptcd1Q8C2E4 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ptcd1Q8C2E4 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ptcd1Q8C2E4 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC19.23■□□□□ 0.67
Ptcd1Q8C2E4 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ptcd1Q8C2E4 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC19.23■□□□□ 0.67
Ptcd1Q8C2E4 Mir7023-201ENSMUST00000185093 64 ntBASIC19.23■□□□□ 0.67
Ptcd1Q8C2E4 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ptcd1Q8C2E4 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Ptcd1Q8C2E4 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ptcd1Q8C2E4 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.23■□□□□ 0.67
Ptcd1Q8C2E4 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Ptcd1Q8C2E4 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ptcd1Q8C2E4 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ptcd1Q8C2E4 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ptcd1Q8C2E4 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ptcd1Q8C2E4 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ptcd1Q8C2E4 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ptcd1Q8C2E4 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ptcd1Q8C2E4 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ptcd1Q8C2E4 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ptcd1Q8C2E4 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ptcd1Q8C2E4 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ptcd1Q8C2E4 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ptcd1Q8C2E4 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ptcd1Q8C2E4 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ptcd1Q8C2E4 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Ptcd1Q8C2E4 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ptcd1Q8C2E4 Gm8344-201ENSMUST00000119813 856 ntBASIC19.22■□□□□ 0.67
Ptcd1Q8C2E4 Gm13597-201ENSMUST00000121239 375 ntBASIC19.22■□□□□ 0.67
Ptcd1Q8C2E4 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC19.22■□□□□ 0.67
Ptcd1Q8C2E4 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC19.22■□□□□ 0.67
Ptcd1Q8C2E4 AC093926.2-201ENSMUST00000214468 1228 ntBASIC19.22■□□□□ 0.67
Ptcd1Q8C2E4 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ptcd1Q8C2E4 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ptcd1Q8C2E4 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Ptcd1Q8C2E4 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ptcd1Q8C2E4 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.22■□□□□ 0.67
Ptcd1Q8C2E4 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ptcd1Q8C2E4 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC19.22■□□□□ 0.67
Ptcd1Q8C2E4 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ptcd1Q8C2E4 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ptcd1Q8C2E4 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC19.22■□□□□ 0.67
Ptcd1Q8C2E4 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ptcd1Q8C2E4 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ptcd1Q8C2E4 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ptcd1Q8C2E4 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ptcd1Q8C2E4 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ptcd1Q8C2E4 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Ptcd1Q8C2E4 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ptcd1Q8C2E4 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ptcd1Q8C2E4 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ptcd1Q8C2E4 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Ptcd1Q8C2E4 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ptcd1Q8C2E4 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ptcd1Q8C2E4 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ptcd1Q8C2E4 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ptcd1Q8C2E4 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ptcd1Q8C2E4 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ptcd1Q8C2E4 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ptcd1Q8C2E4 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ptcd1Q8C2E4 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ptcd1Q8C2E4 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ptcd1Q8C2E4 Gm13332-201ENSMUST00000120451 1398 ntBASIC19.2■□□□□ 0.66
Ptcd1Q8C2E4 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Ptcd1Q8C2E4 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Ptcd1Q8C2E4 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ptcd1Q8C2E4 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ptcd1Q8C2E4 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC19.2■□□□□ 0.66
Ptcd1Q8C2E4 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ptcd1Q8C2E4 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ptcd1Q8C2E4 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ptcd1Q8C2E4 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ptcd1Q8C2E4 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms