Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.34■□□□□ 0.21
Sh3rf3Q8C120 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.34■□□□□ 0.21
Sh3rf3Q8C120 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.34■□□□□ 0.21
Sh3rf3Q8C120 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh3rf3Q8C120 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.34■□□□□ 0.21
Sh3rf3Q8C120 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh3rf3Q8C120 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.34■□□□□ 0.21
Sh3rf3Q8C120 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh3rf3Q8C120 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh3rf3Q8C120 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh3rf3Q8C120 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.33■□□□□ 0.21
Sh3rf3Q8C120 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sh3rf3Q8C120 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sh3rf3Q8C120 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.33■□□□□ 0.21
Sh3rf3Q8C120 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Sh3rf3Q8C120 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sh3rf3Q8C120 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3rf3Q8C120 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3rf3Q8C120 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Sh3rf3Q8C120 Gm6257-201ENSMUST00000163864 910 ntBASIC16.33■□□□□ 0.2
Sh3rf3Q8C120 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Sh3rf3Q8C120 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3rf3Q8C120 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.33■□□□□ 0.2
Sh3rf3Q8C120 Gm7506-201ENSMUST00000207758 815 ntBASIC16.33■□□□□ 0.2
Sh3rf3Q8C120 Gm18669-201ENSMUST00000216049 778 ntBASIC16.33■□□□□ 0.2
Sh3rf3Q8C120 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.33■□□□□ 0.2
Sh3rf3Q8C120 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3rf3Q8C120 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3rf3Q8C120 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3rf3Q8C120 Gm10819-201ENSMUST00000099988 561 ntBASIC16.33■□□□□ 0.2
Sh3rf3Q8C120 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Sh3rf3Q8C120 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3rf3Q8C120 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Sh3rf3Q8C120 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3rf3Q8C120 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Sh3rf3Q8C120 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3rf3Q8C120 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3rf3Q8C120 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Sh3rf3Q8C120 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3rf3Q8C120 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3rf3Q8C120 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3rf3Q8C120 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3rf3Q8C120 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Sh3rf3Q8C120 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3rf3Q8C120 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Sh3rf3Q8C120 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Sh3rf3Q8C120 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3rf3Q8C120 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3rf3Q8C120 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3rf3Q8C120 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Sh3rf3Q8C120 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.32■□□□□ 0.2
Sh3rf3Q8C120 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.32■□□□□ 0.2
Sh3rf3Q8C120 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3rf3Q8C120 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3rf3Q8C120 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Sh3rf3Q8C120 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.32■□□□□ 0.2
Sh3rf3Q8C120 Gm28033-201ENSMUST00000184224 96 ntBASIC16.32■□□□□ 0.2
Sh3rf3Q8C120 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3rf3Q8C120 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3rf3Q8C120 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Sh3rf3Q8C120 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3rf3Q8C120 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.32■□□□□ 0.2
Sh3rf3Q8C120 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3rf3Q8C120 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3rf3Q8C120 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3rf3Q8C120 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Sh3rf3Q8C120 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3rf3Q8C120 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3rf3Q8C120 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3rf3Q8C120 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Sh3rf3Q8C120 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3rf3Q8C120 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3rf3Q8C120 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3rf3Q8C120 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3rf3Q8C120 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Sh3rf3Q8C120 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Sh3rf3Q8C120 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3rf3Q8C120 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.31■□□□□ 0.2
Sh3rf3Q8C120 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3rf3Q8C120 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.31■□□□□ 0.2
Sh3rf3Q8C120 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3rf3Q8C120 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3rf3Q8C120 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.31■□□□□ 0.2
Sh3rf3Q8C120 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.31■□□□□ 0.2
Sh3rf3Q8C120 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Sh3rf3Q8C120 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3rf3Q8C120 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.31■□□□□ 0.2
Sh3rf3Q8C120 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Sh3rf3Q8C120 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Sh3rf3Q8C120 Grk6-207ENSMUST00000225925 2769 ntBASIC16.31■□□□□ 0.2
Sh3rf3Q8C120 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.31■□□□□ 0.2
Sh3rf3Q8C120 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3rf3Q8C120 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3rf3Q8C120 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh3rf3Q8C120 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3rf3Q8C120 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Sh3rf3Q8C120 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3rf3Q8C120 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3rf3Q8C120 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3rf3Q8C120 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms