Protein–RNA interactions for Protein: Q8BFU8

Slc17a8, Vesicular glutamate transporter 3, mousemouse

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc17a8Q8BFU8 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Slc17a8Q8BFU8 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc17a8Q8BFU8 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Slc17a8Q8BFU8 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc17a8Q8BFU8 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc17a8Q8BFU8 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc17a8Q8BFU8 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Slc17a8Q8BFU8 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc17a8Q8BFU8 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Slc17a8Q8BFU8 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc17a8Q8BFU8 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc17a8Q8BFU8 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Slc17a8Q8BFU8 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc17a8Q8BFU8 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.31■□□□□ 0.36
Slc17a8Q8BFU8 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.31■□□□□ 0.36
Slc17a8Q8BFU8 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc17a8Q8BFU8 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc17a8Q8BFU8 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc17a8Q8BFU8 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc17a8Q8BFU8 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc17a8Q8BFU8 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.31■□□□□ 0.36
Slc17a8Q8BFU8 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Slc17a8Q8BFU8 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Slc17a8Q8BFU8 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.31■□□□□ 0.36
Slc17a8Q8BFU8 Gm18489-201ENSMUST00000172565 551 ntBASIC17.31■□□□□ 0.36
Slc17a8Q8BFU8 Gm18733-201ENSMUST00000173950 856 ntBASIC17.31■□□□□ 0.36
Slc17a8Q8BFU8 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.31■□□□□ 0.36
Slc17a8Q8BFU8 Gm37153-201ENSMUST00000193637 231 ntBASIC17.31■□□□□ 0.36
Slc17a8Q8BFU8 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.31■□□□□ 0.36
Slc17a8Q8BFU8 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc17a8Q8BFU8 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.31■□□□□ 0.36
Slc17a8Q8BFU8 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Slc17a8Q8BFU8 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc17a8Q8BFU8 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc17a8Q8BFU8 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.31■□□□□ 0.36
Slc17a8Q8BFU8 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc17a8Q8BFU8 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc17a8Q8BFU8 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc17a8Q8BFU8 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC17.31■□□□□ 0.36
Slc17a8Q8BFU8 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc17a8Q8BFU8 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Slc17a8Q8BFU8 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc17a8Q8BFU8 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Slc17a8Q8BFU8 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc17a8Q8BFU8 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Slc17a8Q8BFU8 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc17a8Q8BFU8 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc17a8Q8BFU8 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Slc17a8Q8BFU8 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.3■□□□□ 0.36
Slc17a8Q8BFU8 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC17.3■□□□□ 0.36
Slc17a8Q8BFU8 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC17.3■□□□□ 0.36
Slc17a8Q8BFU8 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc17a8Q8BFU8 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Slc17a8Q8BFU8 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.3■□□□□ 0.36
Slc17a8Q8BFU8 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc17a8Q8BFU8 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Slc17a8Q8BFU8 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Slc17a8Q8BFU8 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Slc17a8Q8BFU8 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.29■□□□□ 0.36
Slc17a8Q8BFU8 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Slc17a8Q8BFU8 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Slc17a8Q8BFU8 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.29■□□□□ 0.36
Slc17a8Q8BFU8 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc17a8Q8BFU8 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc17a8Q8BFU8 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc17a8Q8BFU8 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Slc17a8Q8BFU8 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.29■□□□□ 0.36
Slc17a8Q8BFU8 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
Slc17a8Q8BFU8 AC122024.2-201ENSMUST00000220086 871 ntBASIC17.29■□□□□ 0.36
Slc17a8Q8BFU8 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc17a8Q8BFU8 Gm7461-201ENSMUST00000058918 827 ntBASIC17.29■□□□□ 0.36
Slc17a8Q8BFU8 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Slc17a8Q8BFU8 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Slc17a8Q8BFU8 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.29■□□□□ 0.36
Slc17a8Q8BFU8 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc17a8Q8BFU8 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Slc17a8Q8BFU8 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc17a8Q8BFU8 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
Slc17a8Q8BFU8 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slc17a8Q8BFU8 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc17a8Q8BFU8 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc17a8Q8BFU8 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc17a8Q8BFU8 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slc17a8Q8BFU8 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slc17a8Q8BFU8 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slc17a8Q8BFU8 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc17a8Q8BFU8 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc17a8Q8BFU8 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Slc17a8Q8BFU8 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc17a8Q8BFU8 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc17a8Q8BFU8 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Slc17a8Q8BFU8 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.28■□□□□ 0.36
Slc17a8Q8BFU8 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc17a8Q8BFU8 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc17a8Q8BFU8 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc17a8Q8BFU8 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc17a8Q8BFU8 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc17a8Q8BFU8 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slc17a8Q8BFU8 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Slc17a8Q8BFU8 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms