Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Trim50Q810I2 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim50Q810I2 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim50Q810I2 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim50Q810I2 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.27■□□□□ 0.04
Trim50Q810I2 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim50Q810I2 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim50Q810I2 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Trim50Q810I2 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.27■□□□□ 0.04
Trim50Q810I2 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim50Q810I2 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trim50Q810I2 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Trim50Q810I2 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim50Q810I2 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim50Q810I2 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim50Q810I2 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim50Q810I2 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
Trim50Q810I2 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.27■□□□□ 0.04
Trim50Q810I2 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim50Q810I2 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.27■□□□□ 0.04
Trim50Q810I2 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim50Q810I2 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim50Q810I2 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim50Q810I2 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Trim50Q810I2 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim50Q810I2 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim50Q810I2 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim50Q810I2 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trim50Q810I2 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim50Q810I2 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim50Q810I2 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim50Q810I2 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Trim50Q810I2 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim50Q810I2 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trim50Q810I2 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim50Q810I2 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim50Q810I2 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim50Q810I2 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim50Q810I2 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim50Q810I2 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Trim50Q810I2 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim50Q810I2 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim50Q810I2 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim50Q810I2 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.26■□□□□ 0.03
Trim50Q810I2 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.26■□□□□ 0.03
Trim50Q810I2 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim50Q810I2 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.26■□□□□ 0.03
Trim50Q810I2 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim50Q810I2 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim50Q810I2 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim50Q810I2 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Trim50Q810I2 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim50Q810I2 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trim50Q810I2 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim50Q810I2 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim50Q810I2 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim50Q810I2 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim50Q810I2 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim50Q810I2 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim50Q810I2 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim50Q810I2 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim50Q810I2 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim50Q810I2 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim50Q810I2 Gm12644-201ENSMUST00000119935 606 ntBASIC15.25■□□□□ 0.03
Trim50Q810I2 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim50Q810I2 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.25■□□□□ 0.03
Trim50Q810I2 Gm7506-201ENSMUST00000207758 815 ntBASIC15.25■□□□□ 0.03
Trim50Q810I2 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim50Q810I2 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim50Q810I2 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trim50Q810I2 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim50Q810I2 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim50Q810I2 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim50Q810I2 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim50Q810I2 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim50Q810I2 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Trim50Q810I2 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.25■□□□□ 0.03
Trim50Q810I2 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Trim50Q810I2 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim50Q810I2 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim50Q810I2 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim50Q810I2 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trim50Q810I2 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.24■□□□□ 0.03
Trim50Q810I2 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim50Q810I2 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim50Q810I2 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim50Q810I2 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim50Q810I2 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim50Q810I2 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trim50Q810I2 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim50Q810I2 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.24■□□□□ 0.03
Trim50Q810I2 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim50Q810I2 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim50Q810I2 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Trim50Q810I2 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trim50Q810I2 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.24■□□□□ 0.03
Trim50Q810I2 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.24■□□□□ 0.03
Trim50Q810I2 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.24■□□□□ 0.03
Trim50Q810I2 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.24■□□□□ 0.03
Trim50Q810I2 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms