Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh19Q80TF3 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh19Q80TF3 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh19Q80TF3 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh19Q80TF3 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh19Q80TF3 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh19Q80TF3 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh19Q80TF3 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh19Q80TF3 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh19Q80TF3 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh19Q80TF3 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.36■□□□□ 0.05
Pcdh19Q80TF3 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh19Q80TF3 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Pcdh19Q80TF3 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh19Q80TF3 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh19Q80TF3 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Pcdh19Q80TF3 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh19Q80TF3 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh19Q80TF3 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh19Q80TF3 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh19Q80TF3 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh19Q80TF3 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.35■□□□□ 0.05
Pcdh19Q80TF3 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh19Q80TF3 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh19Q80TF3 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
Pcdh19Q80TF3 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh19Q80TF3 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
Pcdh19Q80TF3 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.35■□□□□ 0.05
Pcdh19Q80TF3 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.35■□□□□ 0.05
Pcdh19Q80TF3 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh19Q80TF3 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh19Q80TF3 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh19Q80TF3 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh19Q80TF3 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh19Q80TF3 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh19Q80TF3 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh19Q80TF3 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh19Q80TF3 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Pcdh19Q80TF3 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.35■□□□□ 0.05
Pcdh19Q80TF3 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh19Q80TF3 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh19Q80TF3 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh19Q80TF3 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh19Q80TF3 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Pcdh19Q80TF3 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh19Q80TF3 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh19Q80TF3 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Pcdh19Q80TF3 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Pcdh19Q80TF3 Gm12260-201ENSMUST00000122447 411 ntBASIC15.34■□□□□ 0.05
Pcdh19Q80TF3 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh19Q80TF3 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh19Q80TF3 Gm2213-201ENSMUST00000197485 688 ntBASIC15.34■□□□□ 0.05
Pcdh19Q80TF3 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.34■□□□□ 0.05
Pcdh19Q80TF3 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh19Q80TF3 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh19Q80TF3 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh19Q80TF3 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.34■□□□□ 0.05
Pcdh19Q80TF3 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh19Q80TF3 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh19Q80TF3 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh19Q80TF3 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdh19Q80TF3 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh19Q80TF3 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh19Q80TF3 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Pcdh19Q80TF3 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh19Q80TF3 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh19Q80TF3 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdh19Q80TF3 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Pcdh19Q80TF3 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdh19Q80TF3 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdh19Q80TF3 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Pcdh19Q80TF3 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Pcdh19Q80TF3 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdh19Q80TF3 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
Pcdh19Q80TF3 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh19Q80TF3 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.33■□□□□ 0.04
Pcdh19Q80TF3 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Pcdh19Q80TF3 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh19Q80TF3 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Pcdh19Q80TF3 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh19Q80TF3 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.33■□□□□ 0.04
Pcdh19Q80TF3 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.33■□□□□ 0.04
Pcdh19Q80TF3 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh19Q80TF3 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.33■□□□□ 0.04
Pcdh19Q80TF3 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh19Q80TF3 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.33■□□□□ 0.04
Pcdh19Q80TF3 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.33■□□□□ 0.04
Pcdh19Q80TF3 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh19Q80TF3 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh19Q80TF3 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.33■□□□□ 0.04
Pcdh19Q80TF3 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh19Q80TF3 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh19Q80TF3 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Pcdh19Q80TF3 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh19Q80TF3 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh19Q80TF3 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh19Q80TF3 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh19Q80TF3 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh19Q80TF3 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Pcdh19Q80TF3 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms