Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Rpap1Q80TE0 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Rpap1Q80TE0 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Rpap1Q80TE0 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC24.12■■□□□ 1.45
Rpap1Q80TE0 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Rpap1Q80TE0 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
Rpap1Q80TE0 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC24.12■■□□□ 1.45
Rpap1Q80TE0 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
Rpap1Q80TE0 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC24.12■■□□□ 1.45
Rpap1Q80TE0 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Rpap1Q80TE0 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Rpap1Q80TE0 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rpap1Q80TE0 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC24.11■■□□□ 1.45
Rpap1Q80TE0 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rpap1Q80TE0 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC24.11■■□□□ 1.45
Rpap1Q80TE0 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rpap1Q80TE0 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Rpap1Q80TE0 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC24.11■■□□□ 1.45
Rpap1Q80TE0 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Rpap1Q80TE0 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
Rpap1Q80TE0 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rpap1Q80TE0 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
Rpap1Q80TE0 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rpap1Q80TE0 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rpap1Q80TE0 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Rpap1Q80TE0 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rpap1Q80TE0 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC24.11■■□□□ 1.45
Rpap1Q80TE0 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rpap1Q80TE0 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rpap1Q80TE0 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
Rpap1Q80TE0 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
Rpap1Q80TE0 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC24.1■■□□□ 1.45
Rpap1Q80TE0 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rpap1Q80TE0 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Rpap1Q80TE0 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rpap1Q80TE0 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rpap1Q80TE0 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rpap1Q80TE0 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rpap1Q80TE0 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Rpap1Q80TE0 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rpap1Q80TE0 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rpap1Q80TE0 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Rpap1Q80TE0 Gm6415-201ENSMUST00000118488 348 ntBASIC24.1■■□□□ 1.45
Rpap1Q80TE0 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC24.1■■□□□ 1.45
Rpap1Q80TE0 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC24.1■■□□□ 1.45
Rpap1Q80TE0 Gm27306-201ENSMUST00000183970 107 ntBASIC24.1■■□□□ 1.45
Rpap1Q80TE0 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rpap1Q80TE0 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rpap1Q80TE0 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rpap1Q80TE0 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Rpap1Q80TE0 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Rpap1Q80TE0 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
Rpap1Q80TE0 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Rpap1Q80TE0 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Rpap1Q80TE0 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
Rpap1Q80TE0 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Rpap1Q80TE0 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
Rpap1Q80TE0 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Rpap1Q80TE0 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC24.09■■□□□ 1.45
Rpap1Q80TE0 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC24.09■■□□□ 1.45
Rpap1Q80TE0 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC24.09■■□□□ 1.45
Rpap1Q80TE0 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Rpap1Q80TE0 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC24.09■■□□□ 1.45
Rpap1Q80TE0 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Rpap1Q80TE0 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Rpap1Q80TE0 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC24.08■■□□□ 1.45
Rpap1Q80TE0 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC24.08■■□□□ 1.45
Rpap1Q80TE0 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Rpap1Q80TE0 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Rpap1Q80TE0 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
Rpap1Q80TE0 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
Rpap1Q80TE0 Hist1h2al-201ENSMUST00000091708 339 ntBASIC24.08■■□□□ 1.44
Rpap1Q80TE0 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Rpap1Q80TE0 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Rpap1Q80TE0 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
Rpap1Q80TE0 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC24.07■■□□□ 1.44
Rpap1Q80TE0 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rpap1Q80TE0 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rpap1Q80TE0 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Rpap1Q80TE0 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Rpap1Q80TE0 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Rpap1Q80TE0 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC24.07■■□□□ 1.44
Rpap1Q80TE0 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Rpap1Q80TE0 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC24.07■■□□□ 1.44
Rpap1Q80TE0 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rpap1Q80TE0 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rpap1Q80TE0 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Rpap1Q80TE0 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rpap1Q80TE0 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC24.07■■□□□ 1.44
Rpap1Q80TE0 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Rpap1Q80TE0 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Rpap1Q80TE0 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Rpap1Q80TE0 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Rpap1Q80TE0 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Rpap1Q80TE0 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Rpap1Q80TE0 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Rpap1Q80TE0 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Rpap1Q80TE0 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
Rpap1Q80TE0 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Rpap1Q80TE0 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC24.06■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms