Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vma21Q78T54 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vma21Q78T54 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Vma21Q78T54 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vma21Q78T54 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vma21Q78T54 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vma21Q78T54 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vma21Q78T54 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.79□□□□□ -0.36
Vma21Q78T54 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Vma21Q78T54 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.79□□□□□ -0.36
Vma21Q78T54 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.79□□□□□ -0.36
Vma21Q78T54 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vma21Q78T54 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vma21Q78T54 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vma21Q78T54 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vma21Q78T54 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
Vma21Q78T54 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vma21Q78T54 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vma21Q78T54 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vma21Q78T54 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Vma21Q78T54 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vma21Q78T54 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vma21Q78T54 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vma21Q78T54 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vma21Q78T54 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vma21Q78T54 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vma21Q78T54 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Vma21Q78T54 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vma21Q78T54 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vma21Q78T54 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vma21Q78T54 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC12.78□□□□□ -0.36
Vma21Q78T54 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Vma21Q78T54 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vma21Q78T54 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vma21Q78T54 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vma21Q78T54 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vma21Q78T54 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vma21Q78T54 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vma21Q78T54 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vma21Q78T54 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.78□□□□□ -0.36
Vma21Q78T54 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.78□□□□□ -0.36
Vma21Q78T54 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vma21Q78T54 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vma21Q78T54 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vma21Q78T54 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vma21Q78T54 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Vma21Q78T54 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vma21Q78T54 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vma21Q78T54 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vma21Q78T54 Gm9867-201ENSMUST00000192212 2647 ntBASIC12.77□□□□□ -0.36
Vma21Q78T54 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Vma21Q78T54 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vma21Q78T54 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Vma21Q78T54 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vma21Q78T54 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.77□□□□□ -0.37
Vma21Q78T54 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vma21Q78T54 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.77□□□□□ -0.37
Vma21Q78T54 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vma21Q78T54 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.77□□□□□ -0.37
Vma21Q78T54 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.77□□□□□ -0.37
Vma21Q78T54 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Vma21Q78T54 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vma21Q78T54 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vma21Q78T54 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Vma21Q78T54 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vma21Q78T54 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vma21Q78T54 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vma21Q78T54 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Vma21Q78T54 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Vma21Q78T54 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Vma21Q78T54 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.77□□□□□ -0.37
Vma21Q78T54 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vma21Q78T54 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vma21Q78T54 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Vma21Q78T54 Gm8668-201ENSMUST00000120559 1447 ntBASIC12.77□□□□□ -0.37
Vma21Q78T54 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC12.77□□□□□ -0.37
Vma21Q78T54 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vma21Q78T54 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.37
Vma21Q78T54 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vma21Q78T54 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vma21Q78T54 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vma21Q78T54 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.77□□□□□ -0.37
Vma21Q78T54 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Vma21Q78T54 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vma21Q78T54 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vma21Q78T54 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Vma21Q78T54 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vma21Q78T54 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vma21Q78T54 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
Vma21Q78T54 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vma21Q78T54 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vma21Q78T54 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vma21Q78T54 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vma21Q78T54 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Vma21Q78T54 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vma21Q78T54 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC12.76□□□□□ -0.37
Vma21Q78T54 AC114585.2-202ENSMUST00000228094 426 ntBASIC12.76□□□□□ -0.37
Vma21Q78T54 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vma21Q78T54 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vma21Q78T54 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms