Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ubfd1Q78JW9 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.24■□□□□ 0.03
Ubfd1Q78JW9 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.24■□□□□ 0.03
Ubfd1Q78JW9 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.24■□□□□ 0.03
Ubfd1Q78JW9 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.24■□□□□ 0.03
Ubfd1Q78JW9 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.24■□□□□ 0.03
Ubfd1Q78JW9 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ubfd1Q78JW9 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Ubfd1Q78JW9 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ubfd1Q78JW9 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ubfd1Q78JW9 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ubfd1Q78JW9 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.24■□□□□ 0.03
Ubfd1Q78JW9 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ubfd1Q78JW9 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ubfd1Q78JW9 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ubfd1Q78JW9 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ubfd1Q78JW9 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ubfd1Q78JW9 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ubfd1Q78JW9 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ubfd1Q78JW9 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ubfd1Q78JW9 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.24■□□□□ 0.03
Ubfd1Q78JW9 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ubfd1Q78JW9 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ubfd1Q78JW9 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Ubfd1Q78JW9 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.24■□□□□ 0.03
Ubfd1Q78JW9 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubfd1Q78JW9 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubfd1Q78JW9 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubfd1Q78JW9 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubfd1Q78JW9 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.23■□□□□ 0.03
Ubfd1Q78JW9 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubfd1Q78JW9 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.23■□□□□ 0.03
Ubfd1Q78JW9 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubfd1Q78JW9 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.23■□□□□ 0.03
Ubfd1Q78JW9 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.23■□□□□ 0.03
Ubfd1Q78JW9 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubfd1Q78JW9 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ubfd1Q78JW9 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.23■□□□□ 0.03
Ubfd1Q78JW9 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubfd1Q78JW9 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ubfd1Q78JW9 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.23■□□□□ 0.03
Ubfd1Q78JW9 Gm9682-201ENSMUST00000197505 556 ntBASIC15.23■□□□□ 0.03
Ubfd1Q78JW9 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.23■□□□□ 0.03
Ubfd1Q78JW9 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubfd1Q78JW9 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ubfd1Q78JW9 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ubfd1Q78JW9 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ubfd1Q78JW9 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ubfd1Q78JW9 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubfd1Q78JW9 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubfd1Q78JW9 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.23■□□□□ 0.03
Ubfd1Q78JW9 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubfd1Q78JW9 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubfd1Q78JW9 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.23■□□□□ 0.03
Ubfd1Q78JW9 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubfd1Q78JW9 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.23■□□□□ 0.03
Ubfd1Q78JW9 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubfd1Q78JW9 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ubfd1Q78JW9 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubfd1Q78JW9 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ubfd1Q78JW9 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ubfd1Q78JW9 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ubfd1Q78JW9 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ubfd1Q78JW9 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ubfd1Q78JW9 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ubfd1Q78JW9 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ubfd1Q78JW9 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Ubfd1Q78JW9 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ubfd1Q78JW9 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Ubfd1Q78JW9 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Ubfd1Q78JW9 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.22■□□□□ 0.03
Ubfd1Q78JW9 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.22■□□□□ 0.03
Ubfd1Q78JW9 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ubfd1Q78JW9 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ubfd1Q78JW9 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ubfd1Q78JW9 Gm2213-201ENSMUST00000197485 688 ntBASIC15.22■□□□□ 0.03
Ubfd1Q78JW9 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.22■□□□□ 0.03
Ubfd1Q78JW9 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.22■□□□□ 0.03
Ubfd1Q78JW9 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Ubfd1Q78JW9 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.22■□□□□ 0.03
Ubfd1Q78JW9 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Ubfd1Q78JW9 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ubfd1Q78JW9 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ubfd1Q78JW9 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ubfd1Q78JW9 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ubfd1Q78JW9 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ubfd1Q78JW9 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ubfd1Q78JW9 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ubfd1Q78JW9 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ubfd1Q78JW9 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ubfd1Q78JW9 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ubfd1Q78JW9 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.21■□□□□ 0.03
Ubfd1Q78JW9 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ubfd1Q78JW9 Gm4899-201ENSMUST00000178708 719 ntBASIC15.21■□□□□ 0.03
Ubfd1Q78JW9 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.21■□□□□ 0.03
Ubfd1Q78JW9 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ubfd1Q78JW9 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ubfd1Q78JW9 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ubfd1Q78JW9 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ubfd1Q78JW9 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms