Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC18.75■□□□□ 0.59
Sned1Q70E20 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC18.75■□□□□ 0.59
Sned1Q70E20 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC18.75■□□□□ 0.59
Sned1Q70E20 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sned1Q70E20 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sned1Q70E20 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sned1Q70E20 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Sned1Q70E20 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
Sned1Q70E20 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sned1Q70E20 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sned1Q70E20 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Sned1Q70E20 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sned1Q70E20 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Sned1Q70E20 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sned1Q70E20 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sned1Q70E20 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sned1Q70E20 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sned1Q70E20 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sned1Q70E20 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.74■□□□□ 0.59
Sned1Q70E20 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Sned1Q70E20 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.74■□□□□ 0.59
Sned1Q70E20 Gm13233-201ENSMUST00000118760 1443 ntBASIC18.74■□□□□ 0.59
Sned1Q70E20 Gm13244-201ENSMUST00000118855 1446 ntBASIC18.74■□□□□ 0.59
Sned1Q70E20 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sned1Q70E20 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sned1Q70E20 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sned1Q70E20 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Sned1Q70E20 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sned1Q70E20 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sned1Q70E20 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sned1Q70E20 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Sned1Q70E20 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sned1Q70E20 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sned1Q70E20 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sned1Q70E20 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sned1Q70E20 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sned1Q70E20 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sned1Q70E20 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sned1Q70E20 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sned1Q70E20 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Sned1Q70E20 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sned1Q70E20 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sned1Q70E20 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sned1Q70E20 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
Sned1Q70E20 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Sned1Q70E20 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sned1Q70E20 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.72■□□□□ 0.59
Sned1Q70E20 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sned1Q70E20 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sned1Q70E20 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sned1Q70E20 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sned1Q70E20 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Sned1Q70E20 Asic1-205ENSMUST00000228185 1818 ntBASIC18.72■□□□□ 0.59
Sned1Q70E20 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Sned1Q70E20 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.72■□□□□ 0.59
Sned1Q70E20 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sned1Q70E20 Gm6539-201ENSMUST00000119157 1064 ntBASIC18.72■□□□□ 0.59
Sned1Q70E20 Gm14042-201ENSMUST00000120139 833 ntBASIC18.72■□□□□ 0.59
Sned1Q70E20 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC18.72■□□□□ 0.59
Sned1Q70E20 Gm45384-201ENSMUST00000210451 277 ntBASIC18.72■□□□□ 0.59
Sned1Q70E20 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sned1Q70E20 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sned1Q70E20 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sned1Q70E20 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sned1Q70E20 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sned1Q70E20 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sned1Q70E20 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sned1Q70E20 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sned1Q70E20 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC18.71■□□□□ 0.59
Sned1Q70E20 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Sned1Q70E20 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sned1Q70E20 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
Sned1Q70E20 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
Sned1Q70E20 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Sned1Q70E20 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC18.71■□□□□ 0.59
Sned1Q70E20 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sned1Q70E20 Ighv5-13-201ENSMUST00000193550 290 ntBASIC18.71■□□□□ 0.59
Sned1Q70E20 Ighv8-7-201ENSMUST00000194349 297 ntBASIC18.71■□□□□ 0.59
Sned1Q70E20 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sned1Q70E20 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Sned1Q70E20 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sned1Q70E20 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.71■□□□□ 0.59
Sned1Q70E20 AC149294.4-201ENSMUST00000227870 882 ntBASIC18.71■□□□□ 0.59
Sned1Q70E20 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sned1Q70E20 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sned1Q70E20 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sned1Q70E20 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Sned1Q70E20 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Sned1Q70E20 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sned1Q70E20 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sned1Q70E20 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC18.7■□□□□ 0.58
Sned1Q70E20 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sned1Q70E20 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sned1Q70E20 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sned1Q70E20 Gm42466-201ENSMUST00000202099 1301 ntBASIC18.7■□□□□ 0.58
Sned1Q70E20 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC18.7■□□□□ 0.58
Sned1Q70E20 Gm8597-201ENSMUST00000191525 1109 ntBASIC18.7■□□□□ 0.58
Sned1Q70E20 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC18.7■□□□□ 0.58
Sned1Q70E20 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sned1Q70E20 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms