Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Npc1l1Q6T3U4 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.74■□□□□ 0.59
Npc1l1Q6T3U4 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Npc1l1Q6T3U4 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC18.74■□□□□ 0.59
Npc1l1Q6T3U4 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Npc1l1Q6T3U4 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Npc1l1Q6T3U4 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Npc1l1Q6T3U4 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.74■□□□□ 0.59
Npc1l1Q6T3U4 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.74■□□□□ 0.59
Npc1l1Q6T3U4 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Npc1l1Q6T3U4 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Npc1l1Q6T3U4 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Npc1l1Q6T3U4 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.74■□□□□ 0.59
Npc1l1Q6T3U4 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Npc1l1Q6T3U4 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.74■□□□□ 0.59
Npc1l1Q6T3U4 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.74■□□□□ 0.59
Npc1l1Q6T3U4 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Npc1l1Q6T3U4 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Npc1l1Q6T3U4 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Npc1l1Q6T3U4 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Npc1l1Q6T3U4 Gm5648-201ENSMUST00000122244 1587 ntBASIC18.73■□□□□ 0.59
Npc1l1Q6T3U4 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Npc1l1Q6T3U4 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Npc1l1Q6T3U4 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.73■□□□□ 0.59
Npc1l1Q6T3U4 Gm11873-201ENSMUST00000117877 1304 ntBASIC18.73■□□□□ 0.59
Npc1l1Q6T3U4 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Npc1l1Q6T3U4 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Npc1l1Q6T3U4 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Npc1l1Q6T3U4 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Npc1l1Q6T3U4 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Npc1l1Q6T3U4 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Npc1l1Q6T3U4 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Npc1l1Q6T3U4 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Npc1l1Q6T3U4 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.73■□□□□ 0.59
Npc1l1Q6T3U4 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Npc1l1Q6T3U4 Mir3113-201ENSMUST00000175478 76 ntBASIC18.73■□□□□ 0.59
Npc1l1Q6T3U4 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC18.73■□□□□ 0.59
Npc1l1Q6T3U4 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC18.73■□□□□ 0.59
Npc1l1Q6T3U4 Bloc1s5-203ENSMUST00000224902 612 ntBASIC18.73■□□□□ 0.59
Npc1l1Q6T3U4 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Npc1l1Q6T3U4 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Npc1l1Q6T3U4 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Npc1l1Q6T3U4 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Npc1l1Q6T3U4 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Npc1l1Q6T3U4 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Npc1l1Q6T3U4 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC18.72■□□□□ 0.59
Npc1l1Q6T3U4 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Npc1l1Q6T3U4 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Npc1l1Q6T3U4 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Npc1l1Q6T3U4 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Npc1l1Q6T3U4 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Npc1l1Q6T3U4 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Npc1l1Q6T3U4 H2af-ps-201ENSMUST00000119066 295 ntBASIC18.72■□□□□ 0.59
Npc1l1Q6T3U4 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC18.72■□□□□ 0.59
Npc1l1Q6T3U4 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC18.72■□□□□ 0.59
Npc1l1Q6T3U4 AC151286.1-201ENSMUST00000198489 145 ntBASIC18.72■□□□□ 0.59
Npc1l1Q6T3U4 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC18.72■□□□□ 0.59
Npc1l1Q6T3U4 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Npc1l1Q6T3U4 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Npc1l1Q6T3U4 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC18.72■□□□□ 0.59
Npc1l1Q6T3U4 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Npc1l1Q6T3U4 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Npc1l1Q6T3U4 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.71■□□□□ 0.59
Npc1l1Q6T3U4 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Npc1l1Q6T3U4 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
Npc1l1Q6T3U4 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Npc1l1Q6T3U4 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Npc1l1Q6T3U4 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Npc1l1Q6T3U4 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Npc1l1Q6T3U4 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Npc1l1Q6T3U4 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC18.71■□□□□ 0.59
Npc1l1Q6T3U4 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Npc1l1Q6T3U4 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC18.71■□□□□ 0.59
Npc1l1Q6T3U4 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Npc1l1Q6T3U4 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Npc1l1Q6T3U4 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Npc1l1Q6T3U4 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
Npc1l1Q6T3U4 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Npc1l1Q6T3U4 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Npc1l1Q6T3U4 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Npc1l1Q6T3U4 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Npc1l1Q6T3U4 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Npc1l1Q6T3U4 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Npc1l1Q6T3U4 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC18.7■□□□□ 0.58
Npc1l1Q6T3U4 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Npc1l1Q6T3U4 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Npc1l1Q6T3U4 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Npc1l1Q6T3U4 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Npc1l1Q6T3U4 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Npc1l1Q6T3U4 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Npc1l1Q6T3U4 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Npc1l1Q6T3U4 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Npc1l1Q6T3U4 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC18.7■□□□□ 0.58
Npc1l1Q6T3U4 Gm18489-201ENSMUST00000172565 551 ntBASIC18.7■□□□□ 0.58
Npc1l1Q6T3U4 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Npc1l1Q6T3U4 Ndufaf2-202ENSMUST00000223734 556 ntBASIC18.7■□□□□ 0.58
Npc1l1Q6T3U4 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Npc1l1Q6T3U4 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Npc1l1Q6T3U4 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Npc1l1Q6T3U4 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms