Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.41■□□□□ 0.22
Hmgb4Q6P8W9 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.41■□□□□ 0.22
Hmgb4Q6P8W9 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hmgb4Q6P8W9 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.41■□□□□ 0.22
Hmgb4Q6P8W9 Psmb5-202ENSMUST00000227257 622 ntBASIC16.41■□□□□ 0.22
Hmgb4Q6P8W9 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hmgb4Q6P8W9 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hmgb4Q6P8W9 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Hmgb4Q6P8W9 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Hmgb4Q6P8W9 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hmgb4Q6P8W9 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hmgb4Q6P8W9 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hmgb4Q6P8W9 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hmgb4Q6P8W9 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hmgb4Q6P8W9 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.41■□□□□ 0.22
Hmgb4Q6P8W9 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hmgb4Q6P8W9 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.41■□□□□ 0.22
Hmgb4Q6P8W9 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hmgb4Q6P8W9 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hmgb4Q6P8W9 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hmgb4Q6P8W9 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hmgb4Q6P8W9 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Hmgb4Q6P8W9 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Hmgb4Q6P8W9 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hmgb4Q6P8W9 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Hmgb4Q6P8W9 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hmgb4Q6P8W9 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Hmgb4Q6P8W9 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Hmgb4Q6P8W9 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Hmgb4Q6P8W9 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Hmgb4Q6P8W9 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Hmgb4Q6P8W9 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hmgb4Q6P8W9 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hmgb4Q6P8W9 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hmgb4Q6P8W9 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hmgb4Q6P8W9 Gm25925-201ENSMUST00000158314 306 ntBASIC16.4■□□□□ 0.22
Hmgb4Q6P8W9 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.4■□□□□ 0.22
Hmgb4Q6P8W9 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.4■□□□□ 0.22
Hmgb4Q6P8W9 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Hmgb4Q6P8W9 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Hmgb4Q6P8W9 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.4■□□□□ 0.22
Hmgb4Q6P8W9 AV026068-213ENSMUST00000223675 1171 ntBASIC16.4■□□□□ 0.22
Hmgb4Q6P8W9 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.4■□□□□ 0.22
Hmgb4Q6P8W9 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Hmgb4Q6P8W9 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hmgb4Q6P8W9 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hmgb4Q6P8W9 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hmgb4Q6P8W9 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.4■□□□□ 0.22
Hmgb4Q6P8W9 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.4■□□□□ 0.22
Hmgb4Q6P8W9 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.4■□□□□ 0.22
Hmgb4Q6P8W9 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hmgb4Q6P8W9 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.4■□□□□ 0.22
Hmgb4Q6P8W9 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hmgb4Q6P8W9 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hmgb4Q6P8W9 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hmgb4Q6P8W9 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hmgb4Q6P8W9 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hmgb4Q6P8W9 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hmgb4Q6P8W9 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.4■□□□□ 0.22
Hmgb4Q6P8W9 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hmgb4Q6P8W9 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Hmgb4Q6P8W9 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hmgb4Q6P8W9 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hmgb4Q6P8W9 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hmgb4Q6P8W9 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hmgb4Q6P8W9 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Hmgb4Q6P8W9 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hmgb4Q6P8W9 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hmgb4Q6P8W9 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hmgb4Q6P8W9 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hmgb4Q6P8W9 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.39■□□□□ 0.21
Hmgb4Q6P8W9 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hmgb4Q6P8W9 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.39■□□□□ 0.21
Hmgb4Q6P8W9 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hmgb4Q6P8W9 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.39■□□□□ 0.21
Hmgb4Q6P8W9 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hmgb4Q6P8W9 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hmgb4Q6P8W9 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hmgb4Q6P8W9 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hmgb4Q6P8W9 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hmgb4Q6P8W9 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hmgb4Q6P8W9 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.39■□□□□ 0.21
Hmgb4Q6P8W9 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hmgb4Q6P8W9 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hmgb4Q6P8W9 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hmgb4Q6P8W9 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hmgb4Q6P8W9 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Hmgb4Q6P8W9 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hmgb4Q6P8W9 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hmgb4Q6P8W9 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hmgb4Q6P8W9 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.38■□□□□ 0.21
Hmgb4Q6P8W9 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.38■□□□□ 0.21
Hmgb4Q6P8W9 Gm15467-201ENSMUST00000120582 445 ntBASIC16.38■□□□□ 0.21
Hmgb4Q6P8W9 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.38■□□□□ 0.21
Hmgb4Q6P8W9 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.38■□□□□ 0.21
Hmgb4Q6P8W9 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.38■□□□□ 0.21
Hmgb4Q6P8W9 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.38■□□□□ 0.21
Hmgb4Q6P8W9 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hmgb4Q6P8W9 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hmgb4Q6P8W9 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms