Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Abcf1Q6P542 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Abcf1Q6P542 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Abcf1Q6P542 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Abcf1Q6P542 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Abcf1Q6P542 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
Abcf1Q6P542 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Abcf1Q6P542 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Abcf1Q6P542 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Abcf1Q6P542 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Abcf1Q6P542 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.58■□□□□ 0.41
Abcf1Q6P542 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Abcf1Q6P542 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Abcf1Q6P542 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Abcf1Q6P542 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Abcf1Q6P542 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Abcf1Q6P542 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.58■□□□□ 0.4
Abcf1Q6P542 Mir770-201ENSMUST00000103252 94 ntBASIC17.58■□□□□ 0.4
Abcf1Q6P542 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.58■□□□□ 0.4
Abcf1Q6P542 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Abcf1Q6P542 Gm17808-201ENSMUST00000200859 894 ntBASIC17.58■□□□□ 0.4
Abcf1Q6P542 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Abcf1Q6P542 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Abcf1Q6P542 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Abcf1Q6P542 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Abcf1Q6P542 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Abcf1Q6P542 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Abcf1Q6P542 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Abcf1Q6P542 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Abcf1Q6P542 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Abcf1Q6P542 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Abcf1Q6P542 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Abcf1Q6P542 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Abcf1Q6P542 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Abcf1Q6P542 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Abcf1Q6P542 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Abcf1Q6P542 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Abcf1Q6P542 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Abcf1Q6P542 Gm44443-201ENSMUST00000204396 5633 ntBASIC17.57■□□□□ 0.4
Abcf1Q6P542 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Abcf1Q6P542 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Abcf1Q6P542 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.57■□□□□ 0.4
Abcf1Q6P542 Gm11950-201ENSMUST00000121615 838 ntBASIC17.57■□□□□ 0.4
Abcf1Q6P542 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Abcf1Q6P542 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Abcf1Q6P542 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Abcf1Q6P542 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Abcf1Q6P542 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Abcf1Q6P542 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Abcf1Q6P542 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Abcf1Q6P542 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Abcf1Q6P542 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Abcf1Q6P542 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Abcf1Q6P542 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Abcf1Q6P542 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Abcf1Q6P542 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Abcf1Q6P542 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Abcf1Q6P542 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Abcf1Q6P542 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Abcf1Q6P542 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.56■□□□□ 0.4
Abcf1Q6P542 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Abcf1Q6P542 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Abcf1Q6P542 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Abcf1Q6P542 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Abcf1Q6P542 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Abcf1Q6P542 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Abcf1Q6P542 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Abcf1Q6P542 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Abcf1Q6P542 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Abcf1Q6P542 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Abcf1Q6P542 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.56■□□□□ 0.4
Abcf1Q6P542 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Abcf1Q6P542 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Abcf1Q6P542 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Abcf1Q6P542 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Abcf1Q6P542 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Abcf1Q6P542 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.56■□□□□ 0.4
Abcf1Q6P542 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Abcf1Q6P542 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Abcf1Q6P542 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Abcf1Q6P542 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Abcf1Q6P542 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Abcf1Q6P542 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Abcf1Q6P542 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Abcf1Q6P542 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Abcf1Q6P542 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Abcf1Q6P542 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Abcf1Q6P542 Gm29707-201ENSMUST00000196325 491 ntBASIC17.55■□□□□ 0.4
Abcf1Q6P542 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.55■□□□□ 0.4
Abcf1Q6P542 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Abcf1Q6P542 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Abcf1Q6P542 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Abcf1Q6P542 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Abcf1Q6P542 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Abcf1Q6P542 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Abcf1Q6P542 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Abcf1Q6P542 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.55■□□□□ 0.4
Abcf1Q6P542 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Abcf1Q6P542 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Abcf1Q6P542 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms