Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga7Q6DD96 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga7Q6DD96 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga7Q6DD96 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga7Q6DD96 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga7Q6DD96 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga7Q6DD96 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhga7Q6DD96 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Pcdhga7Q6DD96 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Pcdhga7Q6DD96 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga7Q6DD96 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.24■□□□□ 0.03
Pcdhga7Q6DD96 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhga7Q6DD96 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhga7Q6DD96 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga7Q6DD96 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga7Q6DD96 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhga7Q6DD96 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga7Q6DD96 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga7Q6DD96 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga7Q6DD96 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.23■□□□□ 0.03
Pcdhga7Q6DD96 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga7Q6DD96 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhga7Q6DD96 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga7Q6DD96 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.23■□□□□ 0.03
Pcdhga7Q6DD96 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhga7Q6DD96 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga7Q6DD96 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga7Q6DD96 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga7Q6DD96 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga7Q6DD96 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga7Q6DD96 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga7Q6DD96 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga7Q6DD96 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhga7Q6DD96 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga7Q6DD96 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga7Q6DD96 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.23■□□□□ 0.03
Pcdhga7Q6DD96 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga7Q6DD96 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga7Q6DD96 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga7Q6DD96 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga7Q6DD96 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga7Q6DD96 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Pcdhga7Q6DD96 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga7Q6DD96 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga7Q6DD96 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga7Q6DD96 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga7Q6DD96 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga7Q6DD96 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga7Q6DD96 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga7Q6DD96 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga7Q6DD96 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga7Q6DD96 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga7Q6DD96 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga7Q6DD96 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhga7Q6DD96 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga7Q6DD96 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.22■□□□□ 0.03
Pcdhga7Q6DD96 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga7Q6DD96 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga7Q6DD96 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga7Q6DD96 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga7Q6DD96 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga7Q6DD96 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Pcdhga7Q6DD96 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga7Q6DD96 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.22■□□□□ 0.03
Pcdhga7Q6DD96 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhga7Q6DD96 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga7Q6DD96 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga7Q6DD96 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Pcdhga7Q6DD96 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdhga7Q6DD96 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga7Q6DD96 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga7Q6DD96 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga7Q6DD96 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga7Q6DD96 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga7Q6DD96 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga7Q6DD96 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.21■□□□□ 0.03
Pcdhga7Q6DD96 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga7Q6DD96 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga7Q6DD96 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga7Q6DD96 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga7Q6DD96 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.21■□□□□ 0.03
Pcdhga7Q6DD96 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga7Q6DD96 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga7Q6DD96 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.21■□□□□ 0.03
Pcdhga7Q6DD96 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga7Q6DD96 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga7Q6DD96 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga7Q6DD96 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga7Q6DD96 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Pcdhga7Q6DD96 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga7Q6DD96 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga7Q6DD96 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga7Q6DD96 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga7Q6DD96 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga7Q6DD96 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga7Q6DD96 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga7Q6DD96 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga7Q6DD96 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhga7Q6DD96 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhga7Q6DD96 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.21■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms