Protein–RNA interactions for Protein: Q65CL1

Ctnna3, Catenin alpha-3, mousemouse

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctnna3Q65CL1 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.62■□□□□ 0.41
Ctnna3Q65CL1 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ctnna3Q65CL1 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.62■□□□□ 0.41
Ctnna3Q65CL1 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.62■□□□□ 0.41
Ctnna3Q65CL1 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ctnna3Q65CL1 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ctnna3Q65CL1 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ctnna3Q65CL1 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Ctnna3Q65CL1 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.62■□□□□ 0.41
Ctnna3Q65CL1 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ctnna3Q65CL1 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ctnna3Q65CL1 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ctnna3Q65CL1 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ctnna3Q65CL1 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ctnna3Q65CL1 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ctnna3Q65CL1 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.61■□□□□ 0.41
Ctnna3Q65CL1 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ctnna3Q65CL1 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ctnna3Q65CL1 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ctnna3Q65CL1 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ctnna3Q65CL1 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ctnna3Q65CL1 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ctnna3Q65CL1 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.61■□□□□ 0.41
Ctnna3Q65CL1 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.61■□□□□ 0.41
Ctnna3Q65CL1 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.61■□□□□ 0.41
Ctnna3Q65CL1 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.61■□□□□ 0.41
Ctnna3Q65CL1 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.61■□□□□ 0.41
Ctnna3Q65CL1 Gm10060-201ENSMUST00000212002 111 ntBASIC17.61■□□□□ 0.41
Ctnna3Q65CL1 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ctnna3Q65CL1 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ctnna3Q65CL1 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ctnna3Q65CL1 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ctnna3Q65CL1 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ctnna3Q65CL1 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ctnna3Q65CL1 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ctnna3Q65CL1 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.61■□□□□ 0.41
Ctnna3Q65CL1 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ctnna3Q65CL1 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ctnna3Q65CL1 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ctnna3Q65CL1 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Ctnna3Q65CL1 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ctnna3Q65CL1 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ctnna3Q65CL1 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ctnna3Q65CL1 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ctnna3Q65CL1 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ctnna3Q65CL1 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ctnna3Q65CL1 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ctnna3Q65CL1 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ctnna3Q65CL1 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ctnna3Q65CL1 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ctnna3Q65CL1 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ctnna3Q65CL1 Gm11594-201ENSMUST00000122313 162 ntBASIC17.6■□□□□ 0.41
Ctnna3Q65CL1 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.6■□□□□ 0.41
Ctnna3Q65CL1 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.6■□□□□ 0.41
Ctnna3Q65CL1 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ctnna3Q65CL1 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.6■□□□□ 0.41
Ctnna3Q65CL1 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ctnna3Q65CL1 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ctnna3Q65CL1 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Ctnna3Q65CL1 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.6■□□□□ 0.41
Ctnna3Q65CL1 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ctnna3Q65CL1 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ctnna3Q65CL1 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.6■□□□□ 0.41
Ctnna3Q65CL1 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ctnna3Q65CL1 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ctnna3Q65CL1 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ctnna3Q65CL1 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ctnna3Q65CL1 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ctnna3Q65CL1 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ctnna3Q65CL1 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Ctnna3Q65CL1 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Ctnna3Q65CL1 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ctnna3Q65CL1 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ctnna3Q65CL1 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ctnna3Q65CL1 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ctnna3Q65CL1 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.59■□□□□ 0.41
Ctnna3Q65CL1 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.59■□□□□ 0.41
Ctnna3Q65CL1 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.59■□□□□ 0.41
Ctnna3Q65CL1 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.59■□□□□ 0.41
Ctnna3Q65CL1 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.59■□□□□ 0.41
Ctnna3Q65CL1 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ctnna3Q65CL1 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ctnna3Q65CL1 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ctnna3Q65CL1 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
Ctnna3Q65CL1 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ctnna3Q65CL1 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ctnna3Q65CL1 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ctnna3Q65CL1 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ctnna3Q65CL1 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ctnna3Q65CL1 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.59■□□□□ 0.41
Ctnna3Q65CL1 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ctnna3Q65CL1 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ctnna3Q65CL1 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ctnna3Q65CL1 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ctnna3Q65CL1 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ctnna3Q65CL1 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Ctnna3Q65CL1 Gm15165-201ENSMUST00000118140 502 ntBASIC17.58■□□□□ 0.4
Ctnna3Q65CL1 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Ctnna3Q65CL1 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Ctnna3Q65CL1 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms