Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn9aQ62205 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn9aQ62205 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn9aQ62205 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn9aQ62205 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn9aQ62205 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Scn9aQ62205 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scn9aQ62205 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scn9aQ62205 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scn9aQ62205 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.28■□□□□ 0.52
Scn9aQ62205 Gm13015-201ENSMUST00000118674 204 ntBASIC18.28■□□□□ 0.52
Scn9aQ62205 Gm27989-201ENSMUST00000184721 107 ntBASIC18.28■□□□□ 0.52
Scn9aQ62205 Gm28630-201ENSMUST00000187806 498 ntBASIC18.28■□□□□ 0.52
Scn9aQ62205 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Scn9aQ62205 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Scn9aQ62205 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Scn9aQ62205 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Scn9aQ62205 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scn9aQ62205 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scn9aQ62205 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC18.28■□□□□ 0.52
Scn9aQ62205 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Scn9aQ62205 Gm27680-201ENSMUST00000184192 160 ntBASIC18.28■□□□□ 0.52
Scn9aQ62205 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Scn9aQ62205 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scn9aQ62205 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Scn9aQ62205 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scn9aQ62205 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scn9aQ62205 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scn9aQ62205 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Scn9aQ62205 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Scn9aQ62205 Gm44855-201ENSMUST00000205725 362 ntBASIC18.27■□□□□ 0.52
Scn9aQ62205 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Scn9aQ62205 AC132863.2-201ENSMUST00000226643 799 ntBASIC18.27■□□□□ 0.52
Scn9aQ62205 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scn9aQ62205 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scn9aQ62205 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Scn9aQ62205 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Scn9aQ62205 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
Scn9aQ62205 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Scn9aQ62205 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Scn9aQ62205 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn9aQ62205 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC18.26■□□□□ 0.51
Scn9aQ62205 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Scn9aQ62205 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC18.26■□□□□ 0.51
Scn9aQ62205 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Scn9aQ62205 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn9aQ62205 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn9aQ62205 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Scn9aQ62205 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Scn9aQ62205 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Scn9aQ62205 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Scn9aQ62205 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC18.26■□□□□ 0.51
Scn9aQ62205 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC18.26■□□□□ 0.51
Scn9aQ62205 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn9aQ62205 Gm14722-201ENSMUST00000118943 689 ntBASIC18.26■□□□□ 0.51
Scn9aQ62205 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn9aQ62205 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn9aQ62205 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn9aQ62205 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn9aQ62205 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn9aQ62205 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn9aQ62205 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn9aQ62205 Gm18737-201ENSMUST00000173594 937 ntBASIC18.25■□□□□ 0.51
Scn9aQ62205 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Scn9aQ62205 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC18.25■□□□□ 0.51
Scn9aQ62205 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn9aQ62205 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn9aQ62205 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn9aQ62205 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Scn9aQ62205 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.25■□□□□ 0.51
Scn9aQ62205 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Scn9aQ62205 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn9aQ62205 Gm10499-201ENSMUST00000174094 934 ntBASIC18.24■□□□□ 0.51
Scn9aQ62205 Gm9794-201ENSMUST00000202370 423 ntBASIC18.24■□□□□ 0.51
Scn9aQ62205 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC18.24■□□□□ 0.51
Scn9aQ62205 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC18.24■□□□□ 0.51
Scn9aQ62205 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn9aQ62205 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn9aQ62205 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Scn9aQ62205 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn9aQ62205 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Scn9aQ62205 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC18.24■□□□□ 0.51
Scn9aQ62205 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn9aQ62205 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Scn9aQ62205 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn9aQ62205 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn9aQ62205 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.24■□□□□ 0.51
Scn9aQ62205 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Scn9aQ62205 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC18.24■□□□□ 0.51
Scn9aQ62205 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC18.24■□□□□ 0.51
Scn9aQ62205 AC135669.1-201ENSMUST00000213585 412 ntBASIC18.24■□□□□ 0.51
Scn9aQ62205 Gm6888-201ENSMUST00000221983 706 ntBASIC18.24■□□□□ 0.51
Scn9aQ62205 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
Scn9aQ62205 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn9aQ62205 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Scn9aQ62205 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
Scn9aQ62205 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Scn9aQ62205 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn9aQ62205 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Scn9aQ62205 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms