Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Sox17Q61473 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox17Q61473 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox17Q61473 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sox17Q61473 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.74□□□□□ -0.05
Sox17Q61473 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox17Q61473 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sox17Q61473 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox17Q61473 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox17Q61473 Gm10653-202ENSMUST00000139570 835 ntBASIC14.74□□□□□ -0.05
Sox17Q61473 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sox17Q61473 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Sox17Q61473 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Sox17Q61473 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sox17Q61473 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sox17Q61473 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox17Q61473 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sox17Q61473 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sox17Q61473 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sox17Q61473 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.74□□□□□ -0.05
Sox17Q61473 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox17Q61473 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.74□□□□□ -0.05
Sox17Q61473 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sox17Q61473 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox17Q61473 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox17Q61473 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sox17Q61473 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox17Q61473 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sox17Q61473 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.73□□□□□ -0.05
Sox17Q61473 Gm27463-201ENSMUST00000183569 57 ntBASIC14.73□□□□□ -0.05
Sox17Q61473 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC14.73□□□□□ -0.05
Sox17Q61473 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC14.73□□□□□ -0.05
Sox17Q61473 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox17Q61473 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sox17Q61473 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox17Q61473 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.73□□□□□ -0.05
Sox17Q61473 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox17Q61473 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Sox17Q61473 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox17Q61473 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox17Q61473 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Sox17Q61473 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.73□□□□□ -0.05
Sox17Q61473 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sox17Q61473 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
Sox17Q61473 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sox17Q61473 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.72□□□□□ -0.05
Sox17Q61473 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox17Q61473 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox17Q61473 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox17Q61473 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox17Q61473 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox17Q61473 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox17Q61473 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Sox17Q61473 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.72□□□□□ -0.05
Sox17Q61473 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox17Q61473 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sox17Q61473 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox17Q61473 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox17Q61473 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox17Q61473 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox17Q61473 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Sox17Q61473 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox17Q61473 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC14.72□□□□□ -0.05
Sox17Q61473 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.72□□□□□ -0.05
Sox17Q61473 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.72□□□□□ -0.05
Sox17Q61473 Slc35b2-207ENSMUST00000226086 850 ntBASIC14.72□□□□□ -0.05
Sox17Q61473 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox17Q61473 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox17Q61473 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox17Q61473 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox17Q61473 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox17Q61473 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox17Q61473 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox17Q61473 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Sox17Q61473 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox17Q61473 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox17Q61473 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox17Q61473 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Sox17Q61473 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Sox17Q61473 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox17Q61473 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox17Q61473 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.71□□□□□ -0.05
Sox17Q61473 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
Sox17Q61473 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Sox17Q61473 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.71□□□□□ -0.05
Sox17Q61473 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Sox17Q61473 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.71□□□□□ -0.05
Sox17Q61473 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox17Q61473 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Sox17Q61473 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.71□□□□□ -0.05
Sox17Q61473 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Sox17Q61473 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sox17Q61473 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sox17Q61473 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sox17Q61473 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Sox17Q61473 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sox17Q61473 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.71□□□□□ -0.06
Sox17Q61473 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.71□□□□□ -0.06
Sox17Q61473 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sox17Q61473 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms