Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcd1Q61466 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcd1Q61466 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcd1Q61466 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Smarcd1Q61466 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Smarcd1Q61466 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcd1Q61466 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcd1Q61466 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.3■□□□□ 0.2
Smarcd1Q61466 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcd1Q61466 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcd1Q61466 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.3■□□□□ 0.2
Smarcd1Q61466 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Smarcd1Q61466 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcd1Q61466 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcd1Q61466 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcd1Q61466 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.3■□□□□ 0.2
Smarcd1Q61466 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcd1Q61466 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.3■□□□□ 0.2
Smarcd1Q61466 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.3■□□□□ 0.2
Smarcd1Q61466 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.3■□□□□ 0.2
Smarcd1Q61466 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.3■□□□□ 0.2
Smarcd1Q61466 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcd1Q61466 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Smarcd1Q61466 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcd1Q61466 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Smarcd1Q61466 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Smarcd1Q61466 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcd1Q61466 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcd1Q61466 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.29■□□□□ 0.2
Smarcd1Q61466 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcd1Q61466 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcd1Q61466 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.29■□□□□ 0.2
Smarcd1Q61466 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcd1Q61466 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcd1Q61466 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcd1Q61466 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcd1Q61466 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Smarcd1Q61466 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Smarcd1Q61466 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcd1Q61466 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcd1Q61466 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcd1Q61466 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcd1Q61466 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Smarcd1Q61466 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.29■□□□□ 0.2
Smarcd1Q61466 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.29■□□□□ 0.2
Smarcd1Q61466 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcd1Q61466 Gm27628-201ENSMUST00000184911 107 ntBASIC16.29■□□□□ 0.2
Smarcd1Q61466 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Smarcd1Q61466 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.29■□□□□ 0.2
Smarcd1Q61466 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcd1Q61466 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcd1Q61466 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Smarcd1Q61466 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcd1Q61466 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcd1Q61466 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcd1Q61466 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcd1Q61466 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcd1Q61466 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcd1Q61466 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Smarcd1Q61466 Grk6-207ENSMUST00000225925 2769 ntBASIC16.28■□□□□ 0.2
Smarcd1Q61466 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcd1Q61466 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcd1Q61466 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcd1Q61466 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcd1Q61466 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcd1Q61466 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcd1Q61466 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcd1Q61466 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcd1Q61466 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcd1Q61466 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcd1Q61466 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Smarcd1Q61466 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.28■□□□□ 0.2
Smarcd1Q61466 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Smarcd1Q61466 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcd1Q61466 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcd1Q61466 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcd1Q61466 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.28■□□□□ 0.2
Smarcd1Q61466 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.28■□□□□ 0.2
Smarcd1Q61466 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Smarcd1Q61466 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.28■□□□□ 0.2
Smarcd1Q61466 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcd1Q61466 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcd1Q61466 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcd1Q61466 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcd1Q61466 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcd1Q61466 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcd1Q61466 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.28■□□□□ 0.2
Smarcd1Q61466 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcd1Q61466 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcd1Q61466 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcd1Q61466 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcd1Q61466 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcd1Q61466 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcd1Q61466 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcd1Q61466 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Smarcd1Q61466 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcd1Q61466 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcd1Q61466 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcd1Q61466 Gm18489-201ENSMUST00000172565 551 ntBASIC16.27■□□□□ 0.2
Smarcd1Q61466 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms