Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Six4Q61321 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Six4Q61321 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.8■□□□□ 0.12
Six4Q61321 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Six4Q61321 Gm7862-201ENSMUST00000121461 292 ntBASIC15.8■□□□□ 0.12
Six4Q61321 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Six4Q61321 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Six4Q61321 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.8■□□□□ 0.12
Six4Q61321 Gm6089-201ENSMUST00000197666 938 ntBASIC15.8■□□□□ 0.12
Six4Q61321 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six4Q61321 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Six4Q61321 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six4Q61321 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six4Q61321 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six4Q61321 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six4Q61321 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six4Q61321 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Six4Q61321 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Six4Q61321 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six4Q61321 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Six4Q61321 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six4Q61321 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six4Q61321 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six4Q61321 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six4Q61321 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six4Q61321 Gm28659-201ENSMUST00000188013 759 ntBASIC15.79■□□□□ 0.12
Six4Q61321 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six4Q61321 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Six4Q61321 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six4Q61321 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six4Q61321 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six4Q61321 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Six4Q61321 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.78■□□□□ 0.12
Six4Q61321 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Six4Q61321 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Six4Q61321 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Six4Q61321 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Six4Q61321 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Six4Q61321 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Six4Q61321 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Six4Q61321 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.78■□□□□ 0.12
Six4Q61321 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.78■□□□□ 0.12
Six4Q61321 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.78■□□□□ 0.12
Six4Q61321 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.78■□□□□ 0.12
Six4Q61321 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Six4Q61321 Gm7461-201ENSMUST00000058918 827 ntBASIC15.78■□□□□ 0.12
Six4Q61321 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Six4Q61321 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Six4Q61321 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Six4Q61321 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Six4Q61321 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Six4Q61321 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Six4Q61321 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Six4Q61321 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Six4Q61321 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Six4Q61321 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Six4Q61321 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Six4Q61321 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Six4Q61321 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
Six4Q61321 Gm15358-201ENSMUST00000119249 520 ntBASIC15.77■□□□□ 0.12
Six4Q61321 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.77■□□□□ 0.12
Six4Q61321 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.77■□□□□ 0.12
Six4Q61321 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Six4Q61321 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Six4Q61321 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Six4Q61321 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
Six4Q61321 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
Six4Q61321 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Six4Q61321 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Six4Q61321 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Six4Q61321 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Six4Q61321 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Six4Q61321 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Six4Q61321 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Six4Q61321 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Six4Q61321 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Six4Q61321 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Six4Q61321 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.77■□□□□ 0.11
Six4Q61321 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Six4Q61321 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Six4Q61321 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Six4Q61321 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Six4Q61321 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Six4Q61321 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Six4Q61321 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Six4Q61321 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Six4Q61321 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Six4Q61321 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Six4Q61321 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Six4Q61321 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Six4Q61321 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Six4Q61321 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Six4Q61321 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Six4Q61321 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Six4Q61321 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.76■□□□□ 0.11
Six4Q61321 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.76■□□□□ 0.11
Six4Q61321 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Six4Q61321 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Six4Q61321 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Six4Q61321 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms