Protein–RNA interactions for Protein: Q61290

Cacna1e, Voltage-dependent R-type calcium channel subunit alpha-1E, mousemouse

Predictions only

Length 2,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1eQ61290 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.3■□□□□ 0.04
Cacna1eQ61290 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cacna1eQ61290 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.29■□□□□ 0.04
Cacna1eQ61290 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.29■□□□□ 0.04
Cacna1eQ61290 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1eQ61290 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1eQ61290 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1eQ61290 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Cacna1eQ61290 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1eQ61290 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1eQ61290 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Cacna1eQ61290 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1eQ61290 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1eQ61290 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1eQ61290 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1eQ61290 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Cacna1eQ61290 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1eQ61290 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1eQ61290 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.29■□□□□ 0.04
Cacna1eQ61290 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1eQ61290 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1eQ61290 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.29■□□□□ 0.04
Cacna1eQ61290 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.29■□□□□ 0.04
Cacna1eQ61290 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Cacna1eQ61290 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1eQ61290 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1eQ61290 Gm25948-201ENSMUST00000175334 112 ntBASIC15.29■□□□□ 0.04
Cacna1eQ61290 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.29■□□□□ 0.04
Cacna1eQ61290 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1eQ61290 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.29■□□□□ 0.04
Cacna1eQ61290 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.29■□□□□ 0.04
Cacna1eQ61290 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1eQ61290 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1eQ61290 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1eQ61290 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Cacna1eQ61290 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.29■□□□□ 0.04
Cacna1eQ61290 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1eQ61290 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1eQ61290 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1eQ61290 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1eQ61290 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.28■□□□□ 0.04
Cacna1eQ61290 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1eQ61290 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.28■□□□□ 0.04
Cacna1eQ61290 Gm2272-201ENSMUST00000194903 582 ntBASIC15.28■□□□□ 0.04
Cacna1eQ61290 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Cacna1eQ61290 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1eQ61290 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1eQ61290 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1eQ61290 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1eQ61290 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1eQ61290 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Cacna1eQ61290 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1eQ61290 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1eQ61290 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1eQ61290 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.28■□□□□ 0.04
Cacna1eQ61290 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1eQ61290 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC15.28■□□□□ 0.04
Cacna1eQ61290 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.28■□□□□ 0.04
Cacna1eQ61290 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1eQ61290 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1eQ61290 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1eQ61290 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1eQ61290 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1eQ61290 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1eQ61290 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Cacna1eQ61290 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1eQ61290 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.27■□□□□ 0.04
Cacna1eQ61290 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1eQ61290 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1eQ61290 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.27■□□□□ 0.04
Cacna1eQ61290 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1eQ61290 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.27■□□□□ 0.04
Cacna1eQ61290 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.27■□□□□ 0.04
Cacna1eQ61290 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Cacna1eQ61290 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Cacna1eQ61290 Gm14057-201ENSMUST00000120631 482 ntBASIC15.27■□□□□ 0.04
Cacna1eQ61290 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1eQ61290 Gm27622-201ENSMUST00000183779 60 ntBASIC15.27■□□□□ 0.04
Cacna1eQ61290 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1eQ61290 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1eQ61290 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1eQ61290 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.27■□□□□ 0.03
Cacna1eQ61290 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cacna1eQ61290 Gm22065-201ENSMUST00000103753 110 ntBASIC15.27■□□□□ 0.03
Cacna1eQ61290 Gm22066-201ENSMUST00000103761 110 ntBASIC15.27■□□□□ 0.03
Cacna1eQ61290 Gm24932-201ENSMUST00000103763 110 ntBASIC15.27■□□□□ 0.03
Cacna1eQ61290 Gm24115-201ENSMUST00000103799 110 ntBASIC15.27■□□□□ 0.03
Cacna1eQ61290 Gm22190-201ENSMUST00000103827 110 ntBASIC15.27■□□□□ 0.03
Cacna1eQ61290 Gm22191-201ENSMUST00000103831 110 ntBASIC15.27■□□□□ 0.03
Cacna1eQ61290 Gm24721-201ENSMUST00000103849 110 ntBASIC15.27■□□□□ 0.03
Cacna1eQ61290 Gm28018-201ENSMUST00000103869 110 ntBASIC15.27■□□□□ 0.03
Cacna1eQ61290 Gm26399-201ENSMUST00000103937 110 ntBASIC15.27■□□□□ 0.03
Cacna1eQ61290 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cacna1eQ61290 Gm18889-201ENSMUST00000174284 929 ntBASIC15.27■□□□□ 0.03
Cacna1eQ61290 Gm25349-201ENSMUST00000177728 110 ntBASIC15.27■□□□□ 0.03
Cacna1eQ61290 Gm23616-201ENSMUST00000177797 110 ntBASIC15.27■□□□□ 0.03
Cacna1eQ61290 Gm25871-201ENSMUST00000177816 110 ntBASIC15.27■□□□□ 0.03
Cacna1eQ61290 Gm24752-201ENSMUST00000178240 110 ntBASIC15.27■□□□□ 0.03
Cacna1eQ61290 Gm24496-201ENSMUST00000178287 110 ntBASIC15.27■□□□□ 0.03
Cacna1eQ61290 Gm25649-201ENSMUST00000178476 110 ntBASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms