Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ripk1Q60855 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ripk1Q60855 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ripk1Q60855 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ripk1Q60855 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ripk1Q60855 Prob1-201ENSMUST00000097619 3021 ntBASIC14.8□□□□□ -0.04
Ripk1Q60855 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ripk1Q60855 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ripk1Q60855 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ripk1Q60855 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ripk1Q60855 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.8□□□□□ -0.04
Ripk1Q60855 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.8□□□□□ -0.04
Ripk1Q60855 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.8□□□□□ -0.04
Ripk1Q60855 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.8□□□□□ -0.04
Ripk1Q60855 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.8□□□□□ -0.04
Ripk1Q60855 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ripk1Q60855 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ripk1Q60855 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ripk1Q60855 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ripk1Q60855 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ripk1Q60855 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ripk1Q60855 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.8□□□□□ -0.04
Ripk1Q60855 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ripk1Q60855 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ripk1Q60855 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ripk1Q60855 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ripk1Q60855 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ripk1Q60855 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ripk1Q60855 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ripk1Q60855 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Ripk1Q60855 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.79□□□□□ -0.04
Ripk1Q60855 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.79□□□□□ -0.04
Ripk1Q60855 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ripk1Q60855 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ripk1Q60855 Gm6257-201ENSMUST00000163864 910 ntBASIC14.79□□□□□ -0.04
Ripk1Q60855 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ripk1Q60855 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ripk1Q60855 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ripk1Q60855 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.79□□□□□ -0.04
Ripk1Q60855 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.79□□□□□ -0.04
Ripk1Q60855 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.79□□□□□ -0.04
Ripk1Q60855 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ripk1Q60855 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.79□□□□□ -0.04
Ripk1Q60855 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ripk1Q60855 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ripk1Q60855 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ripk1Q60855 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ripk1Q60855 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ripk1Q60855 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ripk1Q60855 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ripk1Q60855 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ripk1Q60855 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ripk1Q60855 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ripk1Q60855 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ripk1Q60855 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ripk1Q60855 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ripk1Q60855 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Ripk1Q60855 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ripk1Q60855 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ripk1Q60855 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ripk1Q60855 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ripk1Q60855 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ripk1Q60855 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ripk1Q60855 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Ripk1Q60855 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ripk1Q60855 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ripk1Q60855 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ripk1Q60855 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ripk1Q60855 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ripk1Q60855 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ripk1Q60855 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ripk1Q60855 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ripk1Q60855 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ripk1Q60855 Gm25406-201ENSMUST00000157599 105 ntBASIC14.78□□□□□ -0.04
Ripk1Q60855 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Ripk1Q60855 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ripk1Q60855 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ripk1Q60855 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ripk1Q60855 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ripk1Q60855 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ripk1Q60855 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
Ripk1Q60855 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ripk1Q60855 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Ripk1Q60855 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ripk1Q60855 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ripk1Q60855 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ripk1Q60855 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ripk1Q60855 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ripk1Q60855 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ripk1Q60855 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ripk1Q60855 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ripk1Q60855 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Ripk1Q60855 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ripk1Q60855 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ripk1Q60855 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ripk1Q60855 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Ripk1Q60855 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ripk1Q60855 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ripk1Q60855 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ripk1Q60855 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms