Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC15.36■□□□□ 0.05
Col12a1Q60847 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col12a1Q60847 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col12a1Q60847 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col12a1Q60847 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
Col12a1Q60847 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col12a1Q60847 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col12a1Q60847 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.35■□□□□ 0.05
Col12a1Q60847 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.35■□□□□ 0.05
Col12a1Q60847 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col12a1Q60847 Gm38225-201ENSMUST00000194001 393 ntBASIC15.35■□□□□ 0.05
Col12a1Q60847 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col12a1Q60847 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col12a1Q60847 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.35■□□□□ 0.05
Col12a1Q60847 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col12a1Q60847 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col12a1Q60847 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Col12a1Q60847 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col12a1Q60847 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col12a1Q60847 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Col12a1Q60847 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Col12a1Q60847 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col12a1Q60847 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Col12a1Q60847 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col12a1Q60847 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col12a1Q60847 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.34■□□□□ 0.05
Col12a1Q60847 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.34■□□□□ 0.05
Col12a1Q60847 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Col12a1Q60847 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col12a1Q60847 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col12a1Q60847 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col12a1Q60847 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.34■□□□□ 0.05
Col12a1Q60847 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Col12a1Q60847 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col12a1Q60847 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Col12a1Q60847 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col12a1Q60847 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col12a1Q60847 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC15.34■□□□□ 0.05
Col12a1Q60847 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC15.34■□□□□ 0.05
Col12a1Q60847 Gm27533-201ENSMUST00000183800 152 ntBASIC15.34■□□□□ 0.05
Col12a1Q60847 Gm42612-201ENSMUST00000197986 623 ntBASIC15.34■□□□□ 0.05
Col12a1Q60847 Gm43170-201ENSMUST00000199827 612 ntBASIC15.34■□□□□ 0.05
Col12a1Q60847 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col12a1Q60847 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col12a1Q60847 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col12a1Q60847 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Col12a1Q60847 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.33■□□□□ 0.05
Col12a1Q60847 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Col12a1Q60847 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.05
Col12a1Q60847 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.33■□□□□ 0.05
Col12a1Q60847 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC15.33■□□□□ 0.05
Col12a1Q60847 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col12a1Q60847 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col12a1Q60847 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC15.33■□□□□ 0.04
Col12a1Q60847 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.33■□□□□ 0.04
Col12a1Q60847 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col12a1Q60847 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col12a1Q60847 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC15.33■□□□□ 0.04
Col12a1Q60847 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col12a1Q60847 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col12a1Q60847 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col12a1Q60847 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col12a1Q60847 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col12a1Q60847 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col12a1Q60847 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col12a1Q60847 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col12a1Q60847 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col12a1Q60847 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Col12a1Q60847 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col12a1Q60847 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col12a1Q60847 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col12a1Q60847 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col12a1Q60847 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Col12a1Q60847 Gm18737-201ENSMUST00000173594 937 ntBASIC15.32■□□□□ 0.04
Col12a1Q60847 Gm8515-201ENSMUST00000194852 576 ntBASIC15.32■□□□□ 0.04
Col12a1Q60847 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col12a1Q60847 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col12a1Q60847 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col12a1Q60847 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col12a1Q60847 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col12a1Q60847 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col12a1Q60847 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.32■□□□□ 0.04
Col12a1Q60847 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col12a1Q60847 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col12a1Q60847 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col12a1Q60847 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Col12a1Q60847 Gm8116-201ENSMUST00000182917 1201 ntBASIC15.32■□□□□ 0.04
Col12a1Q60847 Shd-206ENSMUST00000225145 998 ntBASIC15.32■□□□□ 0.04
Col12a1Q60847 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col12a1Q60847 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col12a1Q60847 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col12a1Q60847 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Col12a1Q60847 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.31■□□□□ 0.04
Col12a1Q60847 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
Col12a1Q60847 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC15.31■□□□□ 0.04
Col12a1Q60847 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.31■□□□□ 0.04
Col12a1Q60847 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col12a1Q60847 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col12a1Q60847 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col12a1Q60847 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms