Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Satb1Q60611 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
Satb1Q60611 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Satb1Q60611 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Satb1Q60611 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Satb1Q60611 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Satb1Q60611 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Satb1Q60611 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Satb1Q60611 Dancr-204ENSMUST00000132389 2347 ntBASIC16.2■□□□□ 0.18
Satb1Q60611 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Satb1Q60611 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Satb1Q60611 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Satb1Q60611 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Satb1Q60611 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.2■□□□□ 0.18
Satb1Q60611 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Satb1Q60611 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC16.2■□□□□ 0.18
Satb1Q60611 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.2■□□□□ 0.18
Satb1Q60611 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Satb1Q60611 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.2■□□□□ 0.18
Satb1Q60611 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.2■□□□□ 0.18
Satb1Q60611 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Satb1Q60611 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.2■□□□□ 0.18
Satb1Q60611 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Satb1Q60611 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Satb1Q60611 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Satb1Q60611 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Satb1Q60611 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Satb1Q60611 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Satb1Q60611 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.2■□□□□ 0.18
Satb1Q60611 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Satb1Q60611 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.2■□□□□ 0.18
Satb1Q60611 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Satb1Q60611 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Satb1Q60611 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Satb1Q60611 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Satb1Q60611 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Satb1Q60611 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Satb1Q60611 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Satb1Q60611 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Satb1Q60611 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.19■□□□□ 0.18
Satb1Q60611 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Satb1Q60611 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Satb1Q60611 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Satb1Q60611 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Satb1Q60611 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Satb1Q60611 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Satb1Q60611 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Satb1Q60611 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Satb1Q60611 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.19■□□□□ 0.18
Satb1Q60611 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC16.19■□□□□ 0.18
Satb1Q60611 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Satb1Q60611 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC16.19■□□□□ 0.18
Satb1Q60611 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.19■□□□□ 0.18
Satb1Q60611 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.19■□□□□ 0.18
Satb1Q60611 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Satb1Q60611 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.19■□□□□ 0.18
Satb1Q60611 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.19■□□□□ 0.18
Satb1Q60611 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Satb1Q60611 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Satb1Q60611 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Satb1Q60611 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Satb1Q60611 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Satb1Q60611 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Satb1Q60611 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Satb1Q60611 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Satb1Q60611 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Satb1Q60611 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Satb1Q60611 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Satb1Q60611 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Satb1Q60611 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Satb1Q60611 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Satb1Q60611 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Satb1Q60611 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Satb1Q60611 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Satb1Q60611 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Satb1Q60611 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Satb1Q60611 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Satb1Q60611 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Satb1Q60611 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Satb1Q60611 Gm4459-201ENSMUST00000118750 468 ntBASIC16.18■□□□□ 0.18
Satb1Q60611 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Satb1Q60611 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.18■□□□□ 0.18
Satb1Q60611 Mir7023-201ENSMUST00000185093 64 ntBASIC16.18■□□□□ 0.18
Satb1Q60611 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.18■□□□□ 0.18
Satb1Q60611 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Satb1Q60611 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Satb1Q60611 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Satb1Q60611 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Satb1Q60611 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Satb1Q60611 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.18■□□□□ 0.18
Satb1Q60611 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Satb1Q60611 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Satb1Q60611 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Satb1Q60611 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Satb1Q60611 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Satb1Q60611 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Satb1Q60611 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.18■□□□□ 0.18
Satb1Q60611 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Satb1Q60611 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.17■□□□□ 0.18
Satb1Q60611 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms