Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 CT025555.1-201ENSMUST00000225901 1217 ntBASIC20.36■□□□□ 0.85
Scaf1Q5U4C3 CT030684.1-201ENSMUST00000227292 914 ntBASIC20.36■□□□□ 0.85
Scaf1Q5U4C3 AC154532.1-201ENSMUST00000227860 965 ntBASIC20.36■□□□□ 0.85
Scaf1Q5U4C3 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Scaf1Q5U4C3 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scaf1Q5U4C3 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC20.36■□□□□ 0.85
Scaf1Q5U4C3 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Scaf1Q5U4C3 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scaf1Q5U4C3 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scaf1Q5U4C3 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Scaf1Q5U4C3 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scaf1Q5U4C3 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
Scaf1Q5U4C3 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scaf1Q5U4C3 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scaf1Q5U4C3 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scaf1Q5U4C3 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scaf1Q5U4C3 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Scaf1Q5U4C3 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scaf1Q5U4C3 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Scaf1Q5U4C3 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Scaf1Q5U4C3 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scaf1Q5U4C3 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scaf1Q5U4C3 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Scaf1Q5U4C3 Gm10499-201ENSMUST00000174094 934 ntBASIC20.35■□□□□ 0.85
Scaf1Q5U4C3 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scaf1Q5U4C3 Gm43474-201ENSMUST00000196415 774 ntBASIC20.35■□□□□ 0.85
Scaf1Q5U4C3 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC20.35■□□□□ 0.85
Scaf1Q5U4C3 AC131710.1-201ENSMUST00000228336 990 ntBASIC20.35■□□□□ 0.85
Scaf1Q5U4C3 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Scaf1Q5U4C3 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC20.35■□□□□ 0.85
Scaf1Q5U4C3 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Scaf1Q5U4C3 AC126250.1-201ENSMUST00000228343 1768 ntBASIC20.35■□□□□ 0.85
Scaf1Q5U4C3 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scaf1Q5U4C3 Gm45293-201ENSMUST00000209754 1812 ntBASIC20.34■□□□□ 0.85
Scaf1Q5U4C3 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scaf1Q5U4C3 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC20.34■□□□□ 0.85
Scaf1Q5U4C3 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scaf1Q5U4C3 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC20.34■□□□□ 0.85
Scaf1Q5U4C3 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Scaf1Q5U4C3 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scaf1Q5U4C3 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scaf1Q5U4C3 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
Scaf1Q5U4C3 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC20.34■□□□□ 0.85
Scaf1Q5U4C3 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Scaf1Q5U4C3 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scaf1Q5U4C3 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scaf1Q5U4C3 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Scaf1Q5U4C3 Gm13616-201ENSMUST00000120600 222 ntBASIC20.34■□□□□ 0.85
Scaf1Q5U4C3 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC20.34■□□□□ 0.85
Scaf1Q5U4C3 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Scaf1Q5U4C3 Mir6956-201ENSMUST00000183598 62 ntBASIC20.34■□□□□ 0.85
Scaf1Q5U4C3 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC20.34■□□□□ 0.85
Scaf1Q5U4C3 AC159114.1-201ENSMUST00000220349 266 ntBASIC20.34■□□□□ 0.85
Scaf1Q5U4C3 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scaf1Q5U4C3 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scaf1Q5U4C3 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scaf1Q5U4C3 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC20.34■□□□□ 0.85
Scaf1Q5U4C3 Gm10154-201ENSMUST00000084445 354 ntBASIC20.34■□□□□ 0.85
Scaf1Q5U4C3 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scaf1Q5U4C3 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC20.34■□□□□ 0.85
Scaf1Q5U4C3 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scaf1Q5U4C3 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scaf1Q5U4C3 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Scaf1Q5U4C3 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scaf1Q5U4C3 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Scaf1Q5U4C3 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Scaf1Q5U4C3 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scaf1Q5U4C3 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Scaf1Q5U4C3 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scaf1Q5U4C3 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scaf1Q5U4C3 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scaf1Q5U4C3 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scaf1Q5U4C3 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
Scaf1Q5U4C3 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Scaf1Q5U4C3 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scaf1Q5U4C3 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Scaf1Q5U4C3 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC20.33■□□□□ 0.85
Scaf1Q5U4C3 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC20.33■□□□□ 0.85
Scaf1Q5U4C3 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Scaf1Q5U4C3 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scaf1Q5U4C3 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Scaf1Q5U4C3 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Scaf1Q5U4C3 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Scaf1Q5U4C3 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Scaf1Q5U4C3 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Scaf1Q5U4C3 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Scaf1Q5U4C3 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scaf1Q5U4C3 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Scaf1Q5U4C3 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scaf1Q5U4C3 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scaf1Q5U4C3 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scaf1Q5U4C3 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Scaf1Q5U4C3 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Scaf1Q5U4C3 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC20.32■□□□□ 0.84
Scaf1Q5U4C3 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Scaf1Q5U4C3 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scaf1Q5U4C3 Gm16026-204ENSMUST00000162652 683 ntBASIC20.32■□□□□ 0.84
Scaf1Q5U4C3 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scaf1Q5U4C3 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scaf1Q5U4C3 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms