Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.79■□□□□ 0.6
Vps54Q5SPW0 AC158538.2-201ENSMUST00000225455 906 ntBASIC18.79■□□□□ 0.6
Vps54Q5SPW0 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps54Q5SPW0 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Vps54Q5SPW0 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps54Q5SPW0 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps54Q5SPW0 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps54Q5SPW0 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.79■□□□□ 0.6
Vps54Q5SPW0 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Vps54Q5SPW0 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps54Q5SPW0 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.78■□□□□ 0.6
Vps54Q5SPW0 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC18.78■□□□□ 0.6
Vps54Q5SPW0 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC18.78■□□□□ 0.6
Vps54Q5SPW0 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Vps54Q5SPW0 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC18.78■□□□□ 0.6
Vps54Q5SPW0 Gm27628-201ENSMUST00000184911 107 ntBASIC18.78■□□□□ 0.6
Vps54Q5SPW0 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC18.78■□□□□ 0.6
Vps54Q5SPW0 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps54Q5SPW0 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Vps54Q5SPW0 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps54Q5SPW0 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.78■□□□□ 0.6
Vps54Q5SPW0 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps54Q5SPW0 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Vps54Q5SPW0 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Vps54Q5SPW0 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps54Q5SPW0 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps54Q5SPW0 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Vps54Q5SPW0 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC18.77■□□□□ 0.6
Vps54Q5SPW0 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Vps54Q5SPW0 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Vps54Q5SPW0 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps54Q5SPW0 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps54Q5SPW0 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Vps54Q5SPW0 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.77■□□□□ 0.6
Vps54Q5SPW0 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Vps54Q5SPW0 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC18.77■□□□□ 0.6
Vps54Q5SPW0 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Vps54Q5SPW0 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps54Q5SPW0 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Vps54Q5SPW0 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.77■□□□□ 0.6
Vps54Q5SPW0 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps54Q5SPW0 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps54Q5SPW0 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps54Q5SPW0 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps54Q5SPW0 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Vps54Q5SPW0 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Vps54Q5SPW0 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Vps54Q5SPW0 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Vps54Q5SPW0 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Vps54Q5SPW0 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Vps54Q5SPW0 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.77■□□□□ 0.59
Vps54Q5SPW0 Gm13337-201ENSMUST00000119183 1594 ntBASIC18.76■□□□□ 0.59
Vps54Q5SPW0 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps54Q5SPW0 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Vps54Q5SPW0 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps54Q5SPW0 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps54Q5SPW0 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps54Q5SPW0 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps54Q5SPW0 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps54Q5SPW0 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps54Q5SPW0 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps54Q5SPW0 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps54Q5SPW0 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps54Q5SPW0 Gm6184-201ENSMUST00000120403 1261 ntBASIC18.76■□□□□ 0.59
Vps54Q5SPW0 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps54Q5SPW0 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC18.76■□□□□ 0.59
Vps54Q5SPW0 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
Vps54Q5SPW0 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Vps54Q5SPW0 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps54Q5SPW0 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps54Q5SPW0 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps54Q5SPW0 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Vps54Q5SPW0 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps54Q5SPW0 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Vps54Q5SPW0 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Vps54Q5SPW0 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps54Q5SPW0 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps54Q5SPW0 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps54Q5SPW0 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Vps54Q5SPW0 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Vps54Q5SPW0 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps54Q5SPW0 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps54Q5SPW0 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps54Q5SPW0 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC18.75■□□□□ 0.59
Vps54Q5SPW0 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps54Q5SPW0 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps54Q5SPW0 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Vps54Q5SPW0 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC18.75■□□□□ 0.59
Vps54Q5SPW0 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Vps54Q5SPW0 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Vps54Q5SPW0 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC18.75■□□□□ 0.59
Vps54Q5SPW0 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps54Q5SPW0 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps54Q5SPW0 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps54Q5SPW0 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Vps54Q5SPW0 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Vps54Q5SPW0 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC18.74■□□□□ 0.59
Vps54Q5SPW0 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Vps54Q5SPW0 Dancr-204ENSMUST00000132389 2347 ntBASIC18.74■□□□□ 0.59
Vps54Q5SPW0 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms