Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6d-4Q5R1I0 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav6d-4Q5R1I0 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav6d-4Q5R1I0 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6d-4Q5R1I0 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6d-4Q5R1I0 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6d-4Q5R1I0 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6d-4Q5R1I0 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Trav6d-4Q5R1I0 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6d-4Q5R1I0 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6d-4Q5R1I0 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6d-4Q5R1I0 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav6d-4Q5R1I0 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6d-4Q5R1I0 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6d-4Q5R1I0 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6d-4Q5R1I0 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6d-4Q5R1I0 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.15□□□□□ -0.3
Trav6d-4Q5R1I0 Gm1401-201ENSMUST00000122048 772 ntBASIC13.15□□□□□ -0.3
Trav6d-4Q5R1I0 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav6d-4Q5R1I0 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.15□□□□□ -0.3
Trav6d-4Q5R1I0 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trav6d-4Q5R1I0 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.15□□□□□ -0.3
Trav6d-4Q5R1I0 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Trav6d-4Q5R1I0 AW822252-206ENSMUST00000208904 237 ntBASIC13.15□□□□□ -0.3
Trav6d-4Q5R1I0 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6d-4Q5R1I0 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6d-4Q5R1I0 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6d-4Q5R1I0 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav6d-4Q5R1I0 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6d-4Q5R1I0 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav6d-4Q5R1I0 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav6d-4Q5R1I0 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav6d-4Q5R1I0 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-4Q5R1I0 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-4Q5R1I0 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-4Q5R1I0 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-4Q5R1I0 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-4Q5R1I0 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-4Q5R1I0 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-4Q5R1I0 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-4Q5R1I0 Gm13036-201ENSMUST00000117799 748 ntBASIC13.14□□□□□ -0.31
Trav6d-4Q5R1I0 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.14□□□□□ -0.31
Trav6d-4Q5R1I0 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.14□□□□□ -0.31
Trav6d-4Q5R1I0 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.14□□□□□ -0.31
Trav6d-4Q5R1I0 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC13.14□□□□□ -0.31
Trav6d-4Q5R1I0 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-4Q5R1I0 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-4Q5R1I0 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trav6d-4Q5R1I0 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav6d-4Q5R1I0 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-4Q5R1I0 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-4Q5R1I0 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav6d-4Q5R1I0 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-4Q5R1I0 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-4Q5R1I0 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-4Q5R1I0 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-4Q5R1I0 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav6d-4Q5R1I0 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-4Q5R1I0 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-4Q5R1I0 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav6d-4Q5R1I0 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-4Q5R1I0 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-4Q5R1I0 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-4Q5R1I0 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-4Q5R1I0 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-4Q5R1I0 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-4Q5R1I0 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-4Q5R1I0 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Trav6d-4Q5R1I0 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-4Q5R1I0 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-4Q5R1I0 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-4Q5R1I0 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-4Q5R1I0 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-4Q5R1I0 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-4Q5R1I0 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-4Q5R1I0 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-4Q5R1I0 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-4Q5R1I0 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.13□□□□□ -0.31
Trav6d-4Q5R1I0 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.13□□□□□ -0.31
Trav6d-4Q5R1I0 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-4Q5R1I0 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.13□□□□□ -0.31
Trav6d-4Q5R1I0 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-4Q5R1I0 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-4Q5R1I0 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-4Q5R1I0 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-4Q5R1I0 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-4Q5R1I0 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-4Q5R1I0 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-4Q5R1I0 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-4Q5R1I0 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Trav6d-4Q5R1I0 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-4Q5R1I0 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav6d-4Q5R1I0 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-4Q5R1I0 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-4Q5R1I0 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-4Q5R1I0 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-4Q5R1I0 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav6d-4Q5R1I0 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-4Q5R1I0 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-4Q5R1I0 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms