Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7d-4Q5R1H9 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC11.99□□□□□ -0.49
Trav7d-4Q5R1H9 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7d-4Q5R1H9 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7d-4Q5R1H9 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7d-4Q5R1H9 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7d-4Q5R1H9 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Trav7d-4Q5R1H9 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trav7d-4Q5R1H9 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7d-4Q5R1H9 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7d-4Q5R1H9 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7d-4Q5R1H9 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7d-4Q5R1H9 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7d-4Q5R1H9 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav7d-4Q5R1H9 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7d-4Q5R1H9 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7d-4Q5R1H9 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7d-4Q5R1H9 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7d-4Q5R1H9 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7d-4Q5R1H9 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav7d-4Q5R1H9 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav7d-4Q5R1H9 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC11.98□□□□□ -0.49
Trav7d-4Q5R1H9 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7d-4Q5R1H9 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7d-4Q5R1H9 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav7d-4Q5R1H9 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7d-4Q5R1H9 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav7d-4Q5R1H9 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7d-4Q5R1H9 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7d-4Q5R1H9 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav7d-4Q5R1H9 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7d-4Q5R1H9 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7d-4Q5R1H9 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav7d-4Q5R1H9 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7d-4Q5R1H9 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7d-4Q5R1H9 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav7d-4Q5R1H9 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7d-4Q5R1H9 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7d-4Q5R1H9 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav7d-4Q5R1H9 Gm45504-201ENSMUST00000211407 2107 ntBASIC11.98□□□□□ -0.49
Trav7d-4Q5R1H9 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7d-4Q5R1H9 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7d-4Q5R1H9 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7d-4Q5R1H9 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7d-4Q5R1H9 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7d-4Q5R1H9 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7d-4Q5R1H9 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7d-4Q5R1H9 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7d-4Q5R1H9 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7d-4Q5R1H9 AC148324.1-201ENSMUST00000219034 4240 ntBASIC11.97□□□□□ -0.49
Trav7d-4Q5R1H9 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7d-4Q5R1H9 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7d-4Q5R1H9 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7d-4Q5R1H9 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7d-4Q5R1H9 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7d-4Q5R1H9 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7d-4Q5R1H9 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7d-4Q5R1H9 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7d-4Q5R1H9 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7d-4Q5R1H9 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC11.97□□□□□ -0.49
Trav7d-4Q5R1H9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7d-4Q5R1H9 Gm7638-201ENSMUST00000121348 967 ntBASIC11.97□□□□□ -0.49
Trav7d-4Q5R1H9 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC11.97□□□□□ -0.49
Trav7d-4Q5R1H9 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav7d-4Q5R1H9 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7d-4Q5R1H9 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7d-4Q5R1H9 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7d-4Q5R1H9 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7d-4Q5R1H9 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7d-4Q5R1H9 Gm5874-201ENSMUST00000096101 508 ntBASIC11.97□□□□□ -0.49
Trav7d-4Q5R1H9 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Trav7d-4Q5R1H9 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7d-4Q5R1H9 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7d-4Q5R1H9 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7d-4Q5R1H9 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7d-4Q5R1H9 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Trav7d-4Q5R1H9 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav7d-4Q5R1H9 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7d-4Q5R1H9 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7d-4Q5R1H9 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7d-4Q5R1H9 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7d-4Q5R1H9 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7d-4Q5R1H9 Zfp264-201ENSMUST00000208656 1563 ntBASIC11.96□□□□□ -0.49
Trav7d-4Q5R1H9 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav7d-4Q5R1H9 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav7d-4Q5R1H9 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav7d-4Q5R1H9 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav7d-4Q5R1H9 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav7d-4Q5R1H9 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav7d-4Q5R1H9 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav7d-4Q5R1H9 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC11.96□□□□□ -0.49
Trav7d-4Q5R1H9 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav7d-4Q5R1H9 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav7d-4Q5R1H9 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trav7d-4Q5R1H9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trav7d-4Q5R1H9 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Trav7d-4Q5R1H9 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav7d-4Q5R1H9 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav7d-4Q5R1H9 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav7d-4Q5R1H9 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms