Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav5d-4Q5R1F6 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav5d-4Q5R1F6 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trav5d-4Q5R1F6 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Trav5d-4Q5R1F6 AC154471.1-201ENSMUST00000224418 436 ntBASIC13.5□□□□□ -0.25
Trav5d-4Q5R1F6 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav5d-4Q5R1F6 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav5d-4Q5R1F6 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Trav5d-4Q5R1F6 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav5d-4Q5R1F6 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav5d-4Q5R1F6 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.49□□□□□ -0.25
Trav5d-4Q5R1F6 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav5d-4Q5R1F6 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav5d-4Q5R1F6 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav5d-4Q5R1F6 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav5d-4Q5R1F6 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav5d-4Q5R1F6 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.49□□□□□ -0.25
Trav5d-4Q5R1F6 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav5d-4Q5R1F6 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav5d-4Q5R1F6 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav5d-4Q5R1F6 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Trav5d-4Q5R1F6 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trav5d-4Q5R1F6 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.49□□□□□ -0.25
Trav5d-4Q5R1F6 Gm7284-201ENSMUST00000131667 944 ntBASIC13.49□□□□□ -0.25
Trav5d-4Q5R1F6 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.49□□□□□ -0.25
Trav5d-4Q5R1F6 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav5d-4Q5R1F6 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav5d-4Q5R1F6 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav5d-4Q5R1F6 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.49□□□□□ -0.25
Trav5d-4Q5R1F6 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav5d-4Q5R1F6 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC13.49□□□□□ -0.25
Trav5d-4Q5R1F6 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav5d-4Q5R1F6 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav5d-4Q5R1F6 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav5d-4Q5R1F6 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav5d-4Q5R1F6 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav5d-4Q5R1F6 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trav5d-4Q5R1F6 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav5d-4Q5R1F6 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav5d-4Q5R1F6 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav5d-4Q5R1F6 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav5d-4Q5R1F6 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav5d-4Q5R1F6 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5d-4Q5R1F6 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5d-4Q5R1F6 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5d-4Q5R1F6 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5d-4Q5R1F6 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trav5d-4Q5R1F6 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5d-4Q5R1F6 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5d-4Q5R1F6 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5d-4Q5R1F6 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5d-4Q5R1F6 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5d-4Q5R1F6 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav5d-4Q5R1F6 Gm6257-201ENSMUST00000163864 910 ntBASIC13.48□□□□□ -0.25
Trav5d-4Q5R1F6 Mir3081-201ENSMUST00000175305 84 ntBASIC13.48□□□□□ -0.25
Trav5d-4Q5R1F6 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5d-4Q5R1F6 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.48□□□□□ -0.25
Trav5d-4Q5R1F6 Gm33142-201ENSMUST00000193913 867 ntBASIC13.48□□□□□ -0.25
Trav5d-4Q5R1F6 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5d-4Q5R1F6 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5d-4Q5R1F6 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5d-4Q5R1F6 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5d-4Q5R1F6 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5d-4Q5R1F6 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav5d-4Q5R1F6 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.48□□□□□ -0.25
Trav5d-4Q5R1F6 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5d-4Q5R1F6 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trav5d-4Q5R1F6 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5d-4Q5R1F6 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav5d-4Q5R1F6 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5d-4Q5R1F6 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5d-4Q5R1F6 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5d-4Q5R1F6 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5d-4Q5R1F6 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5d-4Q5R1F6 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5d-4Q5R1F6 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5d-4Q5R1F6 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5d-4Q5R1F6 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5d-4Q5R1F6 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5d-4Q5R1F6 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5d-4Q5R1F6 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5d-4Q5R1F6 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5d-4Q5R1F6 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5d-4Q5R1F6 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5d-4Q5R1F6 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5d-4Q5R1F6 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5d-4Q5R1F6 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5d-4Q5R1F6 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5d-4Q5R1F6 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.47□□□□□ -0.25
Trav5d-4Q5R1F6 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5d-4Q5R1F6 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5d-4Q5R1F6 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Trav5d-4Q5R1F6 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Trav5d-4Q5R1F6 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5d-4Q5R1F6 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav5d-4Q5R1F6 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5d-4Q5R1F6 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5d-4Q5R1F6 Otx2os1-206ENSMUST00000228153 787 ntBASIC13.47□□□□□ -0.25
Trav5d-4Q5R1F6 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5d-4Q5R1F6 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms