Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-3Q5R1E6 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-3Q5R1E6 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trav6-3Q5R1E6 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-3Q5R1E6 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trav6-3Q5R1E6 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-3Q5R1E6 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav6-3Q5R1E6 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav6-3Q5R1E6 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav6-3Q5R1E6 BC037039-201ENSMUST00000192003 2205 ntBASIC12.58□□□□□ -0.39
Trav6-3Q5R1E6 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav6-3Q5R1E6 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Trav6-3Q5R1E6 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-3Q5R1E6 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-3Q5R1E6 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-3Q5R1E6 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Trav6-3Q5R1E6 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-3Q5R1E6 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav6-3Q5R1E6 Gm25406-201ENSMUST00000157599 105 ntBASIC12.58□□□□□ -0.4
Trav6-3Q5R1E6 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav6-3Q5R1E6 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-3Q5R1E6 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-3Q5R1E6 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-3Q5R1E6 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav6-3Q5R1E6 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.58□□□□□ -0.4
Trav6-3Q5R1E6 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav6-3Q5R1E6 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-3Q5R1E6 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav6-3Q5R1E6 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav6-3Q5R1E6 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav6-3Q5R1E6 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-3Q5R1E6 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-3Q5R1E6 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-3Q5R1E6 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-3Q5R1E6 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-3Q5R1E6 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav6-3Q5R1E6 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav6-3Q5R1E6 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-3Q5R1E6 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-3Q5R1E6 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-3Q5R1E6 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-3Q5R1E6 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-3Q5R1E6 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-3Q5R1E6 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-3Q5R1E6 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trav6-3Q5R1E6 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-3Q5R1E6 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-3Q5R1E6 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.57□□□□□ -0.4
Trav6-3Q5R1E6 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Trav6-3Q5R1E6 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.57□□□□□ -0.4
Trav6-3Q5R1E6 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-3Q5R1E6 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-3Q5R1E6 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-3Q5R1E6 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-3Q5R1E6 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-3Q5R1E6 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-3Q5R1E6 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.57□□□□□ -0.4
Trav6-3Q5R1E6 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Trav6-3Q5R1E6 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.57□□□□□ -0.4
Trav6-3Q5R1E6 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-3Q5R1E6 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-3Q5R1E6 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-3Q5R1E6 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-3Q5R1E6 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-3Q5R1E6 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-3Q5R1E6 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-3Q5R1E6 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-3Q5R1E6 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-3Q5R1E6 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Trav6-3Q5R1E6 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-3Q5R1E6 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-3Q5R1E6 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-3Q5R1E6 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-3Q5R1E6 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-3Q5R1E6 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-3Q5R1E6 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Trav6-3Q5R1E6 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-3Q5R1E6 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-3Q5R1E6 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-3Q5R1E6 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-3Q5R1E6 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-3Q5R1E6 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav6-3Q5R1E6 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav6-3Q5R1E6 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-3Q5R1E6 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Trav6-3Q5R1E6 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-3Q5R1E6 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav6-3Q5R1E6 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
Trav6-3Q5R1E6 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-3Q5R1E6 Gm13312-201ENSMUST00000119631 718 ntBASIC12.56□□□□□ -0.4
Trav6-3Q5R1E6 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav6-3Q5R1E6 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Trav6-3Q5R1E6 Gm6345-202ENSMUST00000180900 204 ntBASIC12.56□□□□□ -0.4
Trav6-3Q5R1E6 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.56□□□□□ -0.4
Trav6-3Q5R1E6 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.56□□□□□ -0.4
Trav6-3Q5R1E6 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Trav6-3Q5R1E6 Gm7367-201ENSMUST00000057611 492 ntBASIC12.56□□□□□ -0.4
Trav6-3Q5R1E6 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-3Q5R1E6 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-3Q5R1E6 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms