Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.23□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.22□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Gm3375-201ENSMUST00000203929 796 ntBASIC12.22□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.22□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.21□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC12.21□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC12.21□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.21□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.2□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Trav15-1-dv6-1Q5R1D2 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms